PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA04244.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

WOX

Protein Properties

Length: 241aa MW: 27158.2 Da PI: 6.7955

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA04244.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.6	6.6e-21	60	120	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + + +ps+++++++++ l +++e++V++WFqNrRa+ k+ OVA04244.1 60 RQRWTPTPVQLQILERIFDQgTGTPSKQKIKDITNDLtqhgQISETNVYNWFQNRRARSKR 120 89***************99************************************97 PP
2	Wus_type_Homeobox	101.5	6.1e-33	59	122	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtPtp Q++iLe+++++G+ tP+k++i++it+ L+++G+i+++NV++WFQNr+aR+++kq OVA04244.1 59 TRQRWTPTPVQLQILERIFDQGTGTPSKQKIKDITNDLTQHGQISETNVYNWFQNRRARSKRKQ 122 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MTDEQIELLR RQISVYATIC EQLVEMHKAI TAQQDLSGMR LGNIYCDPLM TSSGHKITTR 60 QRWTPTPVQL QILERIFDQG TGTPSKQKIK DITNDLTQHG QISETNVYNW FQNRRARSKR 120 KQLGTAPNNA ESEVETEVES PKEKKAKSES NHSHENSSLR VDEVCFRSSG VSSDLHSSDL 180 HPNKTESMFP SDSGSKSSGS LGHVSFYDSV LSNPRIDHLM GKIEVPGSYN PYRQGESYDL 240 I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	114	122	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	4e-71	WOX family protein