PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA04272.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

TCP

Protein Properties

Length: 480aa MW: 52271.1 Da PI: 7.6109

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA04272.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.7	4.1e-38	90	247	2	133
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................................sss 68 g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWL+++a ai el+++ +++ OVA04272.1 90 SGGKDRHSKVLTAKGLRDRRVRLSVSTAIQFYDLQDRLGYDQPSKAVEWLIKAAADAIAELPSLnsafpdtpkqlsdekrpntaseprfdladvelDTD 188 689***********************************************************99999999998888887554444333333333222 PP TCP 69 saseceaesssssasnsssgkaaksaakskksqksaasalnlak.esrakarararertrekmrik 133 + s ++ +++++++ + +++a+s+ s++s+ s+l+l++ e r kar+rarert++++ ++ OVA04272.1 189 P-------SYHQHQQQQQQHISLSKSACSSTSETSKGSVLSLSRsEIRVKARERARERTAKDKEKE 247 2.......233333333444677788899999999999**999*********99987765 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MEVDEIQTQA CKLSRIGNSR NDSNKIGRKG GDQYQQDEDE EDGDQRKGGI NGITGTTGTA 60 LVGGGFDVGS ESGRLRAWHS SRIFRVSRAS GGKDRHSKVL TAKGLRDRRV RLSVSTAIQF 120 YDLQDRLGYD QPSKAVEWLI KAAADAIAEL PSLNSAFPDT PKQLSDEKRP NTASEPRFDL 180 ADVELDTDPS YHQHQQQQQQ HISLSKSACS STSETSKGSV LSLSRSEIRV KARERARERT 240 AKDKEKEKPD EPSHHHSTQH QQNSQSSSFT ELLTGCGHNS HNPSLSAAQQ NPSFPNFVLK 300 QNRHLPPTQI DYFTGLFGGP GSMRNSHYSS GYSGQTHFGN APPTSHSMAA PPQPFSVTGD 360 HHQELHQFSF LPDQLIPDAA TAGSDYNLNF TISSGIAGFN RGTLQSNSSQ SQLPHQLQQR 420 FSSPADGPNM PFFIGNVAAA SAAAPTENHH QFPAGFDGRL QLCYGDGGGR HSDLKGKGKS

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MEVDEIQTQA CKLSRIGNSR NDSNKIGRKG GDQYQQDEDE EDGDQRKGGI NGITGTTGTA  60
LVGGGFDVGS ESGRLRAWHS SRIFRVSRAS GGKDRHSKVL TAKGLRDRRV RLSVSTAIQF  120
YDLQDRLGYD QPSKAVEWLI KAAADAIAEL PSLNSAFPDT PKQLSDEKRP NTASEPRFDL  180
ADVELDTDPS YHQHQQQQQQ HISLSKSACS STSETSKGSV LSLSRSEIRV KARERARERT  240
AKDKEKEKPD EPSHHHSTQH QQNSQSSSFT ELLTGCGHNS HNPSLSAAQQ NPSFPNFVLK  300
QNRHLPPTQI DYFTGLFGGP GSMRNSHYSS GYSGQTHFGN APPTSHSMAA PPQPFSVTGD  360
HHQELHQFSF LPDQLIPDAA TAGSDYNLNF TISSGIAGFN RGTLQSNSSQ SQLPHQLQQR  420
FSSPADGPNM PFFIGNVAAA SAAAPTENHH QFPAGFDGRL QLCYGDGGGR HSDLKGKGKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	1e-41	TCP family protein