PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA04556.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

NAC

Protein Properties

Length: 465aa MW: 51808.6 Da PI: 4.3901

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA04556.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	64.3	3.6e-20	17	137	6	128
NAM 6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgk........rknratksgyWkatgkdkevlskk 96 F+ tde +v L++ + g +l++ ++i++v+ y++ Pw L ++ +yf s+ k+++tg +at++gyWka +d+++++ + OVA04556.1 17 GFNWTDEGMV-TCLERTICGAPLPV-NMITDVNPYNMLPWLLL------DDVLYFSSSDLKATETGYwkagedhkTDLKATETGYWKAE-EDHKIFA-N 105 68899**9.67********.89**********6......23444444444444444333332221334479**87.6688998.7 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 +++gl++tL fy+g+ap+gekt+W+mh yr+ OVA04556.1 106 CTTIGLRTTLQFYTGQAPSGEKTNWMMHAYRI 137 889*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MCPSAPVSLS TTPEDIGFNW TDEGMVTCLE RTICGAPLPV NMITDVNPYN MLPWLLLDDV 60 LYFSSSDLKA TETGYWKAGE DHKTDLKATE TGYWKAEEDH KIFANCTTIG LRTTLQFYTG 120 QAPSGEKTNW MMHAYRINQE RLLEINKGQD SSSLCRVFLN HCKSPNHEQQ QQHGAGGHDV 180 NGKPVSLNSE ENYQQRGAGV HDVNDKSVSL NPEENNQQRG AGVHEVNDES VSLNPEENNQ 240 QRGADVHDVN DNFVSLNSEE NNQNIIHPTS RSEVISRDNE HGLLAVFEKD LREPNTYYST 300 QDLHENYDFS REDFFELNDL TNPESPTSSS ENSSSLTMSS DDYFDASALL RDIEADQIMQ 360 RKYTDNKLSV PGALSPTPVA IREEPSGAEQ RLLDSLASND VVNMKNVGDG NEGSPKSSEN 420 EVASSSSSES VNQAALAAVE SEAIVDRSSS RMTKLRKKYW CFKPF

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MCPSAPVSLS TTPEDIGFNW TDEGMVTCLE RTICGAPLPV NMITDVNPYN MLPWLLLDDV  60
LYFSSSDLKA TETGYWKAGE DHKTDLKATE TGYWKAEEDH KIFANCTTIG LRTTLQFYTG  120
QAPSGEKTNW MMHAYRINQE RLLEINKGQD SSSLCRVFLN HCKSPNHEQQ QQHGAGGHDV  180
NGKPVSLNSE ENYQQRGAGV HDVNDKSVSL NPEENNQQRG AGVHEVNDES VSLNPEENNQ  240
QRGADVHDVN DNFVSLNSEE NNQNIIHPTS RSEVISRDNE HGLLAVFEKD LREPNTYYST  300
QDLHENYDFS REDFFELNDL TNPESPTSSS ENSSSLTMSS DDYFDASALL RDIEADQIMQ  360
RKYTDNKLSV PGALSPTPVA IREEPSGAEQ RLLDSLASND VVNMKNVGDG NEGSPKSSEN  420
EVASSSSSES VNQAALAAVE SEAIVDRSSS RMTKLRKKYW CFKPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.1	3e-20	NAC family protein