PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA04577.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family FAR1
Protein Properties Length: 188aa    MW: 21648.2 Da    PI: 7.0625
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA04577.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR181.12e-2577167190
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +fY +Y++++GFs+r+++ ++s++n+ +++++f Cske +r++++++ ++ r   + ++tr  C+a+l+v++++  kw+vtk++++H+H+l 
  OVA04577.1  77 EFYVSYGRRTGFSIRTHHIRRSQKNNAVISQDFICSKERFRAKKSEN-KRDRVlpPPPVTRERCNAMLRVTLKDGVKWVVTKFVKDHSHNLL 167
                 6******************************************9999.3333245899*******************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MESSVVRGFD LDKSDGGLQD EMTDEHETED KLSRDLDSYT GENDRIVEGS IEKLPTDGET  60
SEPYLGMDFK SRDDAREFYV SYGRRTGFSI RTHHIRRSQK NNAVISQDFI CSKERFRAKK  120
SENKRDRVLP PPPVTRERCN AMLRVTLKDG VKWVVTKFVK DHSHNLLNPS NVPWRRSDKI  180
LVGEVGES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-24FAR1 family protein