PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA04580.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family FAR1
Protein Properties Length: 249aa    MW: 28296 Da    PI: 7.0648
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA04580.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR186.92.9e-2781162289
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                 fY++YA++vGF +r+s+  +sk +g i++r++vC+keg+++ + k+      + a+tr gCka++++k++k gkw ++k+e+eHnH+l
  OVA04580.1  81 FYDAYARRVGFVTRVSAYCRSKIDGAIISRRLVCNKEGFKKGKVKR------PMAVTREGCKAMINIKRQKPGKWIISKFEKEHNHPL 162
                 9***************************************998766......**********************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MVYADSIEDP EMLENTIVGD LRDGQMIENS VISGVPTRVG DDGGELTENS NEMGLISSYA  60
DVDLEPHEGM EFESEEAAKA FYDAYARRVG FVTRVSAYCR SKIDGAIISR RLVCNKEGFK  120
KGKVKRPMAV TREGCKAMIN IKRQKPGKWI ISKFEKEHNH PLLISSKIRR GSLQNRSAED  180
AKKIRELSYA LQRANRRCAA YREHLDTILK DIEEHTNHLS DKVQGIVHSV TELESQELEE  240
HSHHRRLQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.13e-65FAR1 family protein