PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA04672.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 337aa    MW: 36762.1 Da    PI: 8.4781
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA04672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.78.3e-11101145347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r     R + q+ s+ qky
       OVA04672.1 101 PWTEEEHRMFLLGLQKLGKGDWRGISRNYVISRNPTQVASHAQKY 145
                      8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MTRKCSHCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLTLYTGS NNGSNHQNNS  60
SNHLGSPGDT HDRGPATDGY ASEDFVKGSS SSCRERKKGV PWTEEEHRMF LLGLQKLGKG  120
DWRGISRNYV ISRNPTQVAS HAQKYFIRQS NMSRRKRRSS LFDIIADESV DAPQVVSAVP  180
ISHPEAEIQS NNKLPVPVLD EECESMDSTN SNEKEPLLPK PVGMESSYPI IFPAYVSPYF  240
PFSVPFWPGY ATTTITKDTH EVVKPTALHL KSPINVDELV GISKLSLVES LGEMPPPPSF  300
LSLGLPEGST RQSAFHASNA VTATSSVNSS SSPIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-118MYB_related family protein