PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA04675.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 306aa MW: 34746.4 Da PI: 4.8483

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA04675.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.5	7.1e-14	12	57	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W +eEde+l d+vk++G+++W++I ++ + Rt+k+c++rw + OVA04675.1 12 KGPWMAEEDEILMDYVKKYGPRDWSSIRSKGLLPRTGKSCRLRWVN 57 79***********************8876677********87 PP
2	Myb_DNA-binding	42.3	1.8e-13	68	108	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++++eE+ +d+ +++G++ W++Ia +++ gRt++++k++w OVA04675.1 68 KFSAEEERVVIDLQARFGNK-WARIATYLP-GRTDNDVKNFWS 108 79****************.*****.*********5 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MEGHREEVVM RKGPWMAEED EILMDYVKKY GPRDWSSIRS KGLLPRTGKS CRLRWVNKLK 60 PDLKTGCKFS AEEERVVIDL QARFGNKWAR IATYLPGRTD NDVKNFWSTR QKRLARILQT 120 PTASKSQKNN GKAPVFHELS TLEAPRLGSI SMEEESSLMS QTCQSSSYIG NPEVIKMVAL 180 PDLVKPSSLN LEPSLPEIEF PSIERKPYID LLPQFSFPQL PEPVLDLPLL SENQDLVLDV 240 FGHREISEPE NGSQFSVGLP FFGLGNSDRN NVKGEGDNPT TPDSFFDDFP TDMFDYMEPL 300 PSSSEW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	1e-66	MYB family protein