PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA04724.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

GRF

Protein Properties

Length: 562aa MW: 60833.4 Da PI: 7.9803

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA04724.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.2	7.8e-25	191	234	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v +++k+CErH+hrgr rsrk++e OVA04724.1 191 DPEPGRCRRTDGKKWRCSRDVAPDQKYCERHMHRGRPRSRKHVE 234 79****************************************98 PP
2	QLQ	53.6	6.8e-19	129	164	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT aQ+q+L++Q+l+yKy+++ +P+Pp+Ll +i++ OVA04724.1 129 PFTSAQWQELERQALIYKYMISCVPIPPDLLIPISR 164 8********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MENETTSGFG SDSSDKVTTV VDEKINGGGG TTGLCLKLQR TESFPYKMMM MNQNRSNEIR 60 VGSGCGGPTA VNGSSDGSRL RSDIYDAPGV GGGGSSSSGG GAVARTLQPF NSSSFKSPAA 120 GMAATLKFPF TSAQWQELER QALIYKYMIS CVPIPPDLLI PISRNHSEAT VSHSTLSRSS 180 GFNLRFSNNT DPEPGRCRRT DGKKWRCSRD VAPDQKYCER HMHRGRPRSR KHVEVQTEIN 240 NKINLSVPSM ALTTNTTKSY NLPSGFSTKP DFKVPPFETM ASASPYKDTR SMEWMMKRES 300 IPMAASNQQW EQLMNSKTGL RTNSNNSYPS TPVFQQQQYQ ETLNLNSYTD FGGSESSETQ 360 QQSDQFCLFL NPELTSLDEN LSSDQRQTPR RFIDAWSTAT DSKPTETNNK SSVFASNKFS 420 PSNLSLSMSG CNSTEEEIDQ IEMGLGVKSQ TLSWMTPVSW MASQPGGPLA EVLQSSTSTS 480 KSSINGGGLN LMTDGWVGSN AETSSPRVTT ISSPSGVLQK TLASLSDSSG SSSPNSLTAA 540 AAAVKSEIAL QLLNQSKFQS SS

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MENETTSGFG SDSSDKVTTV VDEKINGGGG TTGLCLKLQR TESFPYKMMM MNQNRSNEIR  60
VGSGCGGPTA VNGSSDGSRL RSDIYDAPGV GGGGSSSSGG GAVARTLQPF NSSSFKSPAA  120
GMAATLKFPF TSAQWQELER QALIYKYMIS CVPIPPDLLI PISRNHSEAT VSHSTLSRSS  180
GFNLRFSNNT DPEPGRCRRT DGKKWRCSRD VAPDQKYCER HMHRGRPRSR KHVEVQTEIN  240
NKINLSVPSM ALTTNTTKSY NLPSGFSTKP DFKVPPFETM ASASPYKDTR SMEWMMKRES  300
IPMAASNQQW EQLMNSKTGL RTNSNNSYPS TPVFQQQQYQ ETLNLNSYTD FGGSESSETQ  360
QQSDQFCLFL NPELTSLDEN LSSDQRQTPR RFIDAWSTAT DSKPTETNNK SSVFASNKFS  420
PSNLSLSMSG CNSTEEEIDQ IEMGLGVKSQ TLSWMTPVSW MASQPGGPLA EVLQSSTSTS  480
KSSINGGGLN LMTDGWVGSN AETSSPRVTT ISSPSGVLQK TLASLSDSSG SSSPNSLTAA  540
AAAVKSEIAL QLLNQSKFQS SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24150.1	1e-38	GRF family protein