PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA04748.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 500aa MW: 55716.6 Da PI: 6.8062

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA04748.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.5	4.2e-12	314	359	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ +++Ka+ L Av YI++L OVA04748.1 314 NHVEAERQRREKLNHRFYALRAVVPNV-----SRMDKASLLADAVSYINEL 359 699*********************6.....4*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MEDIISSSSA SPTSIFNSHQ ETQPITLQQR LQFLVQNRAD IEWWTYAIFW RTSPGDINNG 60 GLVLAWGDGH LQGPKDVTKQ NSYNNRQHFH QNQKFGLALD RKREIDGSVD GTVTDAEWFY 120 MVSLTRSFGA GDGAPGRAFS TGNSVWLTGG QELQQYNCER AKEAQMHGIE TLVCIPTSSG 180 VIELGSSDLI RENWVLIQQA KSLFGSDLAN LVLKQQPNHG GLIPFLDRTL SFADIGLIAG 240 VQDEALHYQQ QKQQISEVLE TKKEGTLMAV GGQSSSVDSE HSDSEGLFMA PAIEKRRPKK 300 RGRKPGNGRE IPLNHVEAER QRREKLNHRF YALRAVVPNV SRMDKASLLA DAVSYINELK 360 TKVEELESQV QNESKKVKIE KIENLGHHQN GTNTTTTTTS STTSVDYFTR SSNSGSNKVV 420 VMEVEVKILG SDAMIRVQSE NLNHPSAKLM DALRDLKFQV HHASVSSVNE LMLQDVVVRI 480 PDGLRTEESL KAALLRRLEQ

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MEDIISSSSA SPTSIFNSHQ ETQPITLQQR LQFLVQNRAD IEWWTYAIFW RTSPGDINNG  60
GLVLAWGDGH LQGPKDVTKQ NSYNNRQHFH QNQKFGLALD RKREIDGSVD GTVTDAEWFY  120
MVSLTRSFGA GDGAPGRAFS TGNSVWLTGG QELQQYNCER AKEAQMHGIE TLVCIPTSSG  180
VIELGSSDLI RENWVLIQQA KSLFGSDLAN LVLKQQPNHG GLIPFLDRTL SFADIGLIAG  240
VQDEALHYQQ QKQQISEVLE TKKEGTLMAV GGQSSSVDSE HSDSEGLFMA PAIEKRRPKK  300
RGRKPGNGRE IPLNHVEAER QRREKLNHRF YALRAVVPNV SRMDKASLLA DAVSYINELK  360
TKVEELESQV QNESKKVKIE KIENLGHHQN GTNTTTTTTS STTSVDYFTR SSNSGSNKVV  420
VMEVEVKILG SDAMIRVQSE NLNHPSAKLM DALRDLKFQV HHASVSSVNE LMLQDVVVRI  480
PDGLRTEESL KAALLRRLEQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	296	304	RRPKKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	1e-76	bHLH family protein