PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA04806.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 471aa MW: 51816.2 Da PI: 7.2529

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA04806.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.6	9.7e-13	405	450	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L +AveYIk+Lq OVA04806.1 405 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKDLQ 450 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MYSGSQTSSK DMNLLFPSST FKNSEGDLQR NNREVSMDVN LFQRRHHQNQ QQQQQQQQQQ 60 QQNQQQLNSG LMRYRSAPSS LLANFINGDD EGEGCDNFIP PHSSPEAETI FARFMSCAAN 120 DSDLREIGEK PTVAASVVNN RNPQFMAAMD QETEENGFPP ASQMMFQTPP PPPPPPQNTL 180 QNQSSNPTEN SYRVVNSMAM DQHPSQLKMG STTNSSNLIR HSSSPAGLFS RLNVENGYAV 240 MRGVGNFSAG NGTNGDATAS NSRLKSQMSF PSRPPSSSGL MSQISEIESE SIGGGNSGEE 300 GSLSNGNGNG NNRFIPGYPI ASWDDSGLEN FTGIKRNRDI NNKMLSGLNP SETQNGDAGN 360 HTTPGLTHHF SLPKTSAEMA AIMQFQDSVP CKIRAKRGCA THPRSIAERV RRTRISERMR 420 KLQELVPNMD KQTNTADMLD LAVEYIKDLQ KQVKTLNDNR ANCTCSSKQK L

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MYSGSQTSSK DMNLLFPSST FKNSEGDLQR NNREVSMDVN LFQRRHHQNQ QQQQQQQQQQ  60
QQNQQQLNSG LMRYRSAPSS LLANFINGDD EGEGCDNFIP PHSSPEAETI FARFMSCAAN  120
DSDLREIGEK PTVAASVVNN RNPQFMAAMD QETEENGFPP ASQMMFQTPP PPPPPPQNTL  180
QNQSSNPTEN SYRVVNSMAM DQHPSQLKMG STTNSSNLIR HSSSPAGLFS RLNVENGYAV  240
MRGVGNFSAG NGTNGDATAS NSRLKSQMSF PSRPPSSSGL MSQISEIESE SIGGGNSGEE  300
GSLSNGNGNG NNRFIPGYPI ASWDDSGLEN FTGIKRNRDI NNKMLSGLNP SETQNGDAGN  360
HTTPGLTHHF SLPKTSAEMA AIMQFQDSVP CKIRAKRGCA THPRSIAERV RRTRISERMR  420
KLQELVPNMD KQTNTADMLD LAVEYIKDLQ KQVKTLNDNR ANCTCSSKQK L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	1e-73	bHLH family protein