PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA04891.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 574aa MW: 63379.6 Da PI: 8.4362

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA04891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.8	4e-13	277	325	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++ + Lr+l+P + ++K +Ka+ L +++eYI+ Lq OVA04891.1 277 RSKHSATEQRRRSKINDR-QILRDLIPLN----DQKRDKASFLLEVIEYIQFLQ 325 889*************.*****9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 574 aa Download sequence
MELPQSRPFG TEGKKPTHDF LSLYNHSSFQ HQDPRPSQGI FLKTRDFLQP LETIGKSNSK 60 GEITVDTSTV EKPVAQTRPP SSSSSSSVEH VLPGGIGTYT ISHISNFNQL VPKPEINSTT 120 TCAVVPASSL EKKADVNKTT TISNSNSSYS GSSFSLWGES VVEKATTAKK GNNTGERHHH 180 VLREQPAENL GQWSSEQPLQ ASTTPYIFRS SFSSLPSSKA TSQKNQTFMD MMKSGKSLQE 240 DEDDDEEFLT KKDVTSQKEL TVRIDGKSND QKANTPRSKH SATEQRRRSK INDRQILRDL 300 IPLNDQKRDK ASFLLEVIEY IQFLQEKVNK YEVPYQGWNQ EPTKLMPWRN RHGPGESIAD 360 HSLAIKNGPG PGLMFAGKFN DHNIPITPPI LANAQNPVEN DRRTSAAYKP MDVDLGVANK 420 AISLPTSMQP DMFISAARSG ALAQPLQRPT CDGENMISKS ETHIWQSRPC AIASGALNEQ 480 DEMAIEGGTI SISNVYSQGL LNNLTKALQS SGVDLSQASI SVQIDLGKQP ISRLTTTKDH 540 ENPSSSNRRM ARSRDASSGE DWEQAQKRLK TEKS

Sequence ? help Back to Top

Protein Sequence Length: 574 aa Download sequence

MELPQSRPFG TEGKKPTHDF LSLYNHSSFQ HQDPRPSQGI FLKTRDFLQP LETIGKSNSK  60
GEITVDTSTV EKPVAQTRPP SSSSSSSVEH VLPGGIGTYT ISHISNFNQL VPKPEINSTT  120
TCAVVPASSL EKKADVNKTT TISNSNSSYS GSSFSLWGES VVEKATTAKK GNNTGERHHH  180
VLREQPAENL GQWSSEQPLQ ASTTPYIFRS SFSSLPSSKA TSQKNQTFMD MMKSGKSLQE  240
DEDDDEEFLT KKDVTSQKEL TVRIDGKSND QKANTPRSKH SATEQRRRSK INDRQILRDL  300
IPLNDQKRDK ASFLLEVIEY IQFLQEKVNK YEVPYQGWNQ EPTKLMPWRN RHGPGESIAD  360
HSLAIKNGPG PGLMFAGKFN DHNIPITPPI LANAQNPVEN DRRTSAAYKP MDVDLGVANK  420
AISLPTSMQP DMFISAARSG ALAQPLQRPT CDGENMISKS ETHIWQSRPC AIASGALNEQ  480
DEMAIEGGTI SISNVYSQGL LNNLTKALQS SGVDLSQASI SVQIDLGKQP ISRLTTTKDH  540
ENPSSSNRRM ARSRDASSGE DWEQAQKRLK TEKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-96	bHLH family protein