PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA04971.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 359aa MW: 40060.9 Da PI: 6.1832

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA04971.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.5e-17	37	84	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll+++++ +G g+W++ a++ g++Rt+k+c++rw++yl OVA04971.1 37 RGPWTHEEDNLLIHYIACHGEGRWNLLAKCSGLKRTGKSCRLRWLNYL 84 89********************************************97 PP
2	Myb_DNA-binding	49.7	8.2e-16	90	133	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE+ l+++++ +lG++ W++Ia++++ gRt++++k++w++ OVA04971.1 90 RGNLTIEEQILIIQLHSKLGNR-WSRIAKHLP-GRTDNEIKNFWRT 133 788999**************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MATMFTVTTK RSCSSLHDEE LEEEEEEEDL DENQLRRGPW THEEDNLLIH YIACHGEGRW 60 NLLAKCSGLK RTGKSCRLRW LNYLKPDVKR GNLTIEEQIL IIQLHSKLGN RWSRIAKHLP 120 GRTDNEIKNF WRTRMQKQAQ KRLKIDIVNS ATFRDAIGSF SIPRVIQNME ELAQSPPVPP 180 QPPLTPPLPP PPPPTITTTE DSLIRVFEGI QNFSSHHQLL MNNDSRLIPR SISSTSSISS 240 SPDSIMNNIS TIPEMSGHPT SPDQAFAGNT TTTTTTTTTT TTGTTSSNVD NYSFLKAPGC 300 YYYVMNSSSP VYDTEAFINL GSSPTSAPGG LLANSISGSH MAENNWVVDD VVAEYGLWK

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MATMFTVTTK RSCSSLHDEE LEEEEEEEDL DENQLRRGPW THEEDNLLIH YIACHGEGRW  60
NLLAKCSGLK RTGKSCRLRW LNYLKPDVKR GNLTIEEQIL IIQLHSKLGN RWSRIAKHLP  120
GRTDNEIKNF WRTRMQKQAQ KRLKIDIVNS ATFRDAIGSF SIPRVIQNME ELAQSPPVPP  180
QPPLTPPLPP PPPPTITTTE DSLIRVFEGI QNFSSHHQLL MNNDSRLIPR SISSTSSISS  240
SPDSIMNNIS TIPEMSGHPT SPDQAFAGNT TTTTTTTTTT TTGTTSSNVD NYSFLKAPGC  300
YYYVMNSSSP VYDTEAFINL GSSPTSAPGG LLANSISGSH MAENNWVVDD VVAEYGLWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68320.1	1e-59	MYB family protein