PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA04990.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family LBD
Protein Properties Length: 302aa    MW: 33294.4 Da    PI: 6.9676
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA04990.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260100.51.6e-314107199
      DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                 +C++C+vlr++C+++C ++p++     p++q++++ +++k++G++ +++l+++ pe+ r+++++sl+yeA+ r+ +P+yG+vg+++++++ql+q+++e+
  OVA04990.1   4 SCNGCRVLRKGCSENCSIRPCLqwiksPESQANATVFLAKFYGRAGLMNLINSGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEA 102
                 6*************************************************************************************************9 PP

      DUF260  95 allke 99 
                 +l ++
  OVA04990.1 103 VLKGA 107
                 98766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MRMSCNGCRV LRKGCSENCS IRPCLQWIKS PESQANATVF LAKFYGRAGL MNLINSGPEH  60
LRPAIFRSLL YEACGRIVNP IYGSVGLLWS GSWQLCQAAV EAVLKGAPIM QIPSEAAVSP  120
SLPFKAYDIR HVSKDENSAA SQELHKVKTR SRFKRTAPQT ARLKAKPDNS VSDSMPEQTA  180
DDSTQLCNLS WNRSYTEELN RSTSHDSSAS QQSEPNGEGY SRETESIFSV ETVEASMVSR  240
AEPELVPKSQ CQSDDSDVEL ELTLGFEPIR AHRSGPAKRQ RSEKNGSDLD ACKMELGLDF  300
PA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.18e-89LBD family protein