PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05170.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Protein Properties

Length: 481aa MW: 54333.9 Da PI: 10.0953

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05170.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.6	2.6e-19	207	290	14	99
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 l++p+ a e+g+++++ ++l+d++grsW v + r+ +gr+ +t+GW +F k n+L++gD+++F++ ++ ++ +l v++frk OVA05170.1 207 YHLTIPRALAIENGLETKR--SIVLQDPEGRSWPVII-SRRPDGRIDMTNGWPQFWKGNRLEVGDTCLFEFLNQsKGNKLSVRIFRK 290 349*********99766..5***********.4666667*********************77666********97 PP
2	B3	77.2	1.8e-24	385	476	4	99
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++ ps+v+ + + +p kfa++h +kk++ +tl+ ++gr+W+v++ + + ++ l kGWk+Fv++n+L+egD+++F+l++r+ f+++v++fr OVA05170.1 385 IMRPSYVHDPCTVNIPSKFAKAHLMKKTQ--IVTLRVSNGRKWQVRC--SCSEHHTKLVKGWKDFVSDNNLEEGDVCIFELVSRKIFKMNVSIFRV 476 6889*****************777655..79**********..666666889**********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MGMKKLKAST SSSNRGPSFF KVMIGDFDEK LQEFFIVCTS FVNLNMLITD PRARLLVLDQ 60 GDHLCSALLD SSLVKPKYSN QGKGEKNDIE SGYQRVLSDI SMGSYPINPS LEVPPGDLGP 120 YKYNGKSKFN VKIYGRTGCE KEVHFNHEEP KSDVKKEKEV ILCTGENPEP RKPVMETEKK 180 AGAVIAASSI KTKRQRFIAI WRHSRKYHLT IPRALAIENG LETKRSIVLQ DPEGRSWPVI 240 ISRRPDGRID MTNGWPQFWK GNRLEVGDTC LFEFLNQSKG NKLSVRIFRK AEVKKPARLL 300 LSKRSTSTAT LNLLNCNDDS TEEVKAAPGS VIPTALSPCS QYLGFELKKG KFKLPKTKYV 360 TTLAEERAIK AASAFESENP FCMIIMRPSY VHDPCTVNIP SKFAKAHLMK KTQIVTLRVS 420 NGRKWQVRCS CSEHHTKLVK GWKDFVSDNN LEEGDVCIFE LVSRKIFKMN VSIFRVSRDV 480 V

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MGMKKLKAST SSSNRGPSFF KVMIGDFDEK LQEFFIVCTS FVNLNMLITD PRARLLVLDQ  60
GDHLCSALLD SSLVKPKYSN QGKGEKNDIE SGYQRVLSDI SMGSYPINPS LEVPPGDLGP  120
YKYNGKSKFN VKIYGRTGCE KEVHFNHEEP KSDVKKEKEV ILCTGENPEP RKPVMETEKK  180
AGAVIAASSI KTKRQRFIAI WRHSRKYHLT IPRALAIENG LETKRSIVLQ DPEGRSWPVI  240
ISRRPDGRID MTNGWPQFWK GNRLEVGDTC LFEFLNQSKG NKLSVRIFRK AEVKKPARLL  300
LSKRSTSTAT LNLLNCNDDS TEEVKAAPGS VIPTALSPCS QYLGFELKKG KFKLPKTKYV  360
TTLAEERAIK AASAFESENP FCMIIMRPSY VHDPCTVNIP SKFAKAHLMK KTQIVTLRVS  420
NGRKWQVRCS CSEHHTKLVK GWKDFVSDNN LEEGDVCIFE LVSRKIFKMN VSIFRVSRDV  480
V

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	191	196	KTKRQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49480.1	3e-26	B3 family protein