PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA05207.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 120aa    MW: 13501.4 Da    PI: 10.3049
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA05207.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF64.98.4e-211765149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                krie    rqvtfskR+ g++K A+EL++LCda+ avi+fs+  k y +
  OVA05207.1 17 KRIEKVDARQVTFSKRKVGLFKNASELCTLCDAKTAVIVFSPAEKPYSF 65
                799999************************************9998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MSSKRNLSKG RRKIEIKRIE KVDARQVTFS KRKVGLFKNA SELCTLCDAK TAVIVFSPAE  60
KPYSFGHPSV DTVVDRYLSG GNYASQNNIS GVHPYVGARI HDLNRQYSEA LNELDAEKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.12e-34M-type_MADS family protein