PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05386.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 533aa MW: 58489.4 Da PI: 8.793

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05386.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.1	1.5e-05	78	100	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H OVA05386.1 78 FVCEICNKGFQRDQNLQLHRRGH 100 89*******************88 PP
2	zf-C2H2	12.6	0.0004	154	176	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ OVA05386.1 154 WKCEKCSKKYAVQSDWKAHSKTC 176 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 533 aa Download sequence
MFPETLSNST SLSEEASGSS GTRIQDLTSL NPIYSSAISP PHQQPEKIKK KRNLPGNPDP 60 DAEVIALSPK TLLATNRFVC EICNKGFQRD QNLQLHRRGH NLPWKLRQRS STEIRKRVYV 120 CPELSCVHHH PSRALGDLTG IKKHFCRKHG EKKWKCEKCS KKYAVQSDWK AHSKTCGTKE 180 YRCDCGTLFS RKDSFITHRA FCDALAEESA RLISNNPNLT TTNNPITPDH HPLPLPLHLQ 240 HQQNPPSSLI FPFPTQHQQN LFPNNNPPLP TPMSLITSSW NNPPVDHHQN PNNHNNSIQN 300 QNPNQIKPET HHQYQNINTT PTSLSSFFQE QPPPPTTPSA HKPLIAPIFL EHTNNNVMMS 360 NTNTAAHMSA TALLQKAANV GPTAIGGTAG GSTLQTQSVG HMGSSSMTRL QMDELGTVSH 420 HMGLGSSSTT GISPDYLQGF PTSSNLATWQ KNDRLTRDFL GLAAGDHHSV SVTNGVDRGG 480 GGGGGAERSQ LNANVNVRDL LTFAGGVDFQ TYDRDHSLLK PSGFGFAGAW GDC

Sequence ? help Back to Top

Protein Sequence Length: 533 aa Download sequence

MFPETLSNST SLSEEASGSS GTRIQDLTSL NPIYSSAISP PHQQPEKIKK KRNLPGNPDP  60
DAEVIALSPK TLLATNRFVC EICNKGFQRD QNLQLHRRGH NLPWKLRQRS STEIRKRVYV  120
CPELSCVHHH PSRALGDLTG IKKHFCRKHG EKKWKCEKCS KKYAVQSDWK AHSKTCGTKE  180
YRCDCGTLFS RKDSFITHRA FCDALAEESA RLISNNPNLT TTNNPITPDH HPLPLPLHLQ  240
HQQNPPSSLI FPFPTQHQQN LFPNNNPPLP TPMSLITSSW NNPPVDHHQN PNNHNNSIQN  300
QNPNQIKPET HHQYQNINTT PTSLSSFFQE QPPPPTTPSA HKPLIAPIFL EHTNNNVMMS  360
NTNTAAHMSA TALLQKAANV GPTAIGGTAG GSTLQTQSVG HMGSSSMTRL QMDELGTVSH  420
HMGLGSSSTT GISPDYLQGF PTSSNLATWQ KNDRLTRDFL GLAAGDHHSV SVTNGVDRGG  480
GGGGGAERSQ LNANVNVRDL LTFAGGVDFQ TYDRDHSLLK PSGFGFAGAW GDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-102	C2H2 family protein