PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05412.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

CPP

Protein Properties

Length: 814aa MW: 89820.5 Da PI: 5.8092

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05412.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.8	1.4e-15	511	548	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag +C e C+C +C+Nk OVA05412.1 511 CKRCNCKKSKCLKLYCECFAAGIYCVEPCSCRECFNKP 548 89**********************************96 PP
2	TCR	49.9	6.4e-16	595	633	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++kkgCnCkks+ClkkYCeC++ g+ Cs +C+C++CkN OVA05412.1 595 RHKKGCNCKKSSCLKKYCECYQGGVGCSISCRCKGCKNA 633 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 814 aa Download sequence
MDTPERKQIG NVISNFEDSP VFSYINSLSP IKPVKSTHIS QTINSLSFSP VPSAFTSSYV 60 ISQKQPRLLR RHCFSELSKP ESSSDSGNEG NRSVGILDSV DVSSCSADTQ EIFDPGSSIQ 120 EVTIDPPNEN SELAIELPRT MEYDCGSPVS DLTFHDIKID PVAEVDVPSA SLAQFVQDIS 180 VKSHHSFETE VELVGLCQLD QTKEEKGCDW ENLISEASNL LLFDSFTDVE APKGQNQNAV 240 DSETRSFTSL PLNLPQDKID DSPTTKPIDL IGSCEHHEVQ ELSNQPTKAA EQKESNHTHS 300 STFHGEQGDN DPKEEMDEKA RNSTPFSCEH HSMRRRCLVF EKAGANKKSF EDGLSSSSSI 360 SCQSDGKFTS DDKQLVTFKS GCGSSRSMLP GIGLHLNALA ATTKDCRVVK HEALASGRQL 420 ISVRSSIASY HCLLSEEKSL AKKSTEAEMC NADNEVLVMQ DTSQSAFGVR EEFNQSSLKK 480 KRHANHLLTF LAENLFPDVR RVEHDGENEG CKRCNCKKSK CLKLYCECFA AGIYCVEPCS 540 CRECFNKPVH EDTVLATRKQ IESRNPLAFA PKVIRTSESV AEIGEESNET PASARHKKGC 600 NCKKSSCLKK YCECYQGGVG CSISCRCKGC KNAFGRKDES TPIGVEEAEA EEEKTESCEK 660 KIADERLPNN EAQKEEEQDS DHVLPMTPSF QIRRPSVQLL FSSSGKLQES PVLSIGSYAQ 720 PSKSQTLQSD FVPPLPKFKL HFQISPEDEA PEVLKGNCLP VTGMKTASPN SKRVRPPHNE 780 LGFRKSRKLV LQSIPSSTSL TPRNGNNDVP IKFK

Sequence ? help Back to Top

Protein Sequence Length: 814 aa Download sequence

MDTPERKQIG NVISNFEDSP VFSYINSLSP IKPVKSTHIS QTINSLSFSP VPSAFTSSYV  60
ISQKQPRLLR RHCFSELSKP ESSSDSGNEG NRSVGILDSV DVSSCSADTQ EIFDPGSSIQ  120
EVTIDPPNEN SELAIELPRT MEYDCGSPVS DLTFHDIKID PVAEVDVPSA SLAQFVQDIS  180
VKSHHSFETE VELVGLCQLD QTKEEKGCDW ENLISEASNL LLFDSFTDVE APKGQNQNAV  240
DSETRSFTSL PLNLPQDKID DSPTTKPIDL IGSCEHHEVQ ELSNQPTKAA EQKESNHTHS  300
STFHGEQGDN DPKEEMDEKA RNSTPFSCEH HSMRRRCLVF EKAGANKKSF EDGLSSSSSI  360
SCQSDGKFTS DDKQLVTFKS GCGSSRSMLP GIGLHLNALA ATTKDCRVVK HEALASGRQL  420
ISVRSSIASY HCLLSEEKSL AKKSTEAEMC NADNEVLVMQ DTSQSAFGVR EEFNQSSLKK  480
KRHANHLLTF LAENLFPDVR RVEHDGENEG CKRCNCKKSK CLKLYCECFA AGIYCVEPCS  540
CRECFNKPVH EDTVLATRKQ IESRNPLAFA PKVIRTSESV AEIGEESNET PASARHKKGC  600
NCKKSSCLKK YCECYQGGVG CSISCRCKGC KNAFGRKDES TPIGVEEAEA EEEKTESCEK  660
KIADERLPNN EAQKEEEQDS DHVLPMTPSF QIRRPSVQLL FSSSGKLQES PVLSIGSYAQ  720
PSKSQTLQSD FVPPLPKFKL HFQISPEDEA PEVLKGNCLP VTGMKTASPN SKRVRPPHNE  780
LGFRKSRKLV LQSIPSSTSL TPRNGNNDVP IKFK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	479	520	KKKRHANHLLTFLAENLFPDVRRVEHDGENEGCKRCNCKKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-119	CPP family protein