PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05533.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Protein Properties

Length: 591aa MW: 64691.8 Da PI: 6.8448

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05533.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.5	6.4e-15	355	442	2	86
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldg 86 +k+l + dv+++gr+vlpkk ae++ ++ + + l++ d + +W++k++y ++ks++yv++ ++ +Fvk ++L++gD ++++ ++ OVA05533.1 355 QKELRNTDVGNLGRIVLPKKDAEANlpPLDAKDGLILQMADmNYSVEWRFKYRYwpNNKSRMYVME-NTGDFVKMHNLQTGDLFMIY-KE 442 68999********************666667778999997788*****888888889988.**************9998.33 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MQRGYAQNEV RVNDSPPSSP NPSSSSSSST SSDSAHGTDP SRFNFSIPPF SRFSGDGFFE 60 EKRKNVEFGE RLIDETIDRR KFLRPTLPVP SLISASAATV DGFSMDKSLN NQVIQSQPGV 120 SGGQAECSHI LPRVTNSWGP QPVENPYIFH CFPYNSICVS SATTPSLKRK SEDSVNSFDP 180 AQMESLFGQL PGGISKKSVL HTGFVPVQAL FQNPLFPTAV RGQPVNYAMT PPLNLEATRN 240 QEMNFFAASR GQLNDNSLGG NASDPMHKQK VVHPRLSSST SVAVVSDGRR NANSEPSAKN 300 VYPLMPEHNA LEATSKPSWV STHSEICLGY LPSAKSYRPE YDKEIEGKGL MLLVQKELRN 360 TDVGNLGRIV LPKKDAEANL PPLDAKDGLI LQMADMNYSV EWRFKYRYWP NNKSRMYVME 420 NTGDFVKMHN LQTGDLFMIY KEEISGKYIV RGKKGIIPLY MGDMVETRDQ GRAQEGESGA 480 ASGQFGSEQR NPVPVDFFVD LKAEQDAIAS RISFDFKGNT GGPSTCQFLP VVEQNHTILA 540 VGVIPSKDGG FTLDSIAPHG EVYGVAHPTL PVGGTILHSS NIFLTPIGLG Q

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MQRGYAQNEV RVNDSPPSSP NPSSSSSSST SSDSAHGTDP SRFNFSIPPF SRFSGDGFFE  60
EKRKNVEFGE RLIDETIDRR KFLRPTLPVP SLISASAATV DGFSMDKSLN NQVIQSQPGV  120
SGGQAECSHI LPRVTNSWGP QPVENPYIFH CFPYNSICVS SATTPSLKRK SEDSVNSFDP  180
AQMESLFGQL PGGISKKSVL HTGFVPVQAL FQNPLFPTAV RGQPVNYAMT PPLNLEATRN  240
QEMNFFAASR GQLNDNSLGG NASDPMHKQK VVHPRLSSST SVAVVSDGRR NANSEPSAKN  300
VYPLMPEHNA LEATSKPSWV STHSEICLGY LPSAKSYRPE YDKEIEGKGL MLLVQKELRN  360
TDVGNLGRIV LPKKDAEANL PPLDAKDGLI LQMADMNYSV EWRFKYRYWP NNKSRMYVME  420
NTGDFVKMHN LQTGDLFMIY KEEISGKYIV RGKKGIIPLY MGDMVETRDQ GRAQEGESGA  480
ASGQFGSEQR NPVPVDFFVD LKAEQDAIAS RISFDFKGNT GGPSTCQFLP VVEQNHTILA  540
VGVIPSKDGG FTLDSIAPHG EVYGVAHPTL PVGGTILHSS NIFLTPIGLG Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26790.1	2e-36	B3 family protein