PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05549.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 497aa MW: 54559.7 Da PI: 6.7061

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05549.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16	2.2e-05	388	425	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L OVA05549.1 388 RKEKLGDRITALQQLVSPF-----GKTDTASVLFEAIEYIKFL 425 677888999*****998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MADEFHNQSG ICSGNWWNSE RNGLSLPFST APNDVGISYG TWGNTTDHHH HQMSSEQMKS 60 RISSDESSSI SGSSSNIVYH HQDAQKQQES DSVGEGGGSS ILMDSTLQMM GFGLSSSSSC 120 SLDWNQNYIS NNNRSSSGRA DDHQVLLKEW SLKNFNGGGG GGGGGEDSGI NGFKQINHGF 180 ALDHQQHPLS SGDRSSECTV TCEGLPTSFP MDSTLYGCPS TLLQGLFEPD HHLQPQQTTS 240 YENPTVNNCH NPSLTNYFMS NSNDLSSTTT SNSWSKFPHQ FLKTTSPPKQ QPSNNNNQSL 300 HFSNKAPFWN ASAAAMANGR SSFFPSQQIQ FLTSNFEEKP NCSNHTVSKP KAEEVRDSSS 360 VMKKSSNEPS FKRPKIETPS PLPTFKVRKE KLGDRITALQ QLVSPFGKTD TASVLFEAIE 420 YIKFLHDQVG VLSAPYLKNG AHMQHHQQNS NKTKEAQGTQ QDLRSRGLCL VPISSTFPVT 480 NETATDFWTP TFGGTYR

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MADEFHNQSG ICSGNWWNSE RNGLSLPFST APNDVGISYG TWGNTTDHHH HQMSSEQMKS  60
RISSDESSSI SGSSSNIVYH HQDAQKQQES DSVGEGGGSS ILMDSTLQMM GFGLSSSSSC  120
SLDWNQNYIS NNNRSSSGRA DDHQVLLKEW SLKNFNGGGG GGGGGEDSGI NGFKQINHGF  180
ALDHQQHPLS SGDRSSECTV TCEGLPTSFP MDSTLYGCPS TLLQGLFEPD HHLQPQQTTS  240
YENPTVNNCH NPSLTNYFMS NSNDLSSTTT SNSWSKFPHQ FLKTTSPPKQ QPSNNNNQSL  300
HFSNKAPFWN ASAAAMANGR SSFFPSQQIQ FLTSNFEEKP NCSNHTVSKP KAEEVRDSSS  360
VMKKSSNEPS FKRPKIETPS PLPTFKVRKE KLGDRITALQ QLVSPFGKTD TASVLFEAIE  420
YIKFLHDQVG VLSAPYLKNG AHMQHHQQNS NKTKEAQGTQ QDLRSRGLCL VPISSTFPVT  480
NETATDFWTP TFGGTYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	2e-59	bHLH family protein