PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA05565.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MIKC_MADS
Protein Properties Length: 142aa    MW: 16639.1 Da    PI: 9.7849
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA05565.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.81.4e-28959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krien++nrqvtfskRr g+lKKA+EL vLCda+  +iifsstgk++ey+s
  OVA05565.1  9 KRIENSTNRQVTFSKRRGGLLKKAHELAVLCDAQLGLIIFSSTGKMFEYCS 59
                79***********************************************96 PP
2K-box61.43.7e-2171139169
       K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 
                 yqk  g + +e ++++  +e++++k+e++nLq + R++ GedL+ L +++L+qLeqqLe+s++kiR++K
  OVA05565.1  71 YQKVAGIRIQEYDNQQIFNEMTRMKNETDNLQASMRRFTGEDLSCLHYNDLEQLEQQLENSVNKIRTRK 139
                 67778888999999******************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MGRGKIEIKR IENSTNRQVT FSKRRGGLLK KAHELAVLCD AQLGLIIFSS TGKMFEYCSS  60
PLNMRQIIER YQKVAGIRIQ EYDNQQIFNE MTRMKNETDN LQASMRRFTG EDLSCLHYND  120
LEQLEQQLEN SVNKIRTRKF IT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23260.33e-49MIKC_MADS family protein