PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA05578.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 220aa    MW: 25209.3 Da    PI: 5.7745
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA05578.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF64.11.5e-201558245
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                +i  k +r++tfskR++g++KKA+ELS+LC+ae a+++fs+ +k
  OVA05578.1 15 KITRKDRREITFSKRKTGLFKKASELSTLCGAETAIVVFSPANK 58
                688899***********************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MEKKTQGRKK IAMEKITRKD RREITFSKRK TGLFKKASEL STLCGAETAI VVFSPANKPF  60
SFGHPSVDSV SDQFLASNSP SEVGESSTIE PSFGDYYRSA NINEFNRQVT EAMIQLEEEE  120
EQGKKLTEIE KVEFRDRFLW NSPLEDLQYH ELEQLKVSME ELKTKVYKEG EERQNGVPPP  180
LSFMAVNPPA MVNPLRSQTN QNNNHTILNG FNYGLDHSYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.11e-34M-type_MADS family protein