PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA05580.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 133aa    MW: 14701.6 Da    PI: 5.2203
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA05580.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF58.96.3e-19346245
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                +i  + +r++tfsk ++g++KKA+ELS+LC +eva+++fs+ +k
  OVA05580.1  3 KITRTDRREITFSKPKTGLFKKASELSTLCCVEVAIVVFSPANK 46
                577789***********************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MEKITRTDRR EITFSKPKTG LFKKASELST LCCVEVAIVV FSPANKPFSF GHPSVDSVSD  60
QFLTSISPSE VSESSTIEPS FGDYYRSANI NEFNRQVTET KVYKEGEEKQ NGVSPPLSFM  120
AVNPPAMVNP LLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.13e-24M-type_MADS family protein