PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05633.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

NF-YC

Protein Properties

Length: 235aa MW: 26710.1 Da PI: 6.0772

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05633.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	181	1.1e-56	65	169	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie++tdfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflvdiv OVA05633.1 65 QLQVFWSNQiqeIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 163 89****98889********************************************************************************** PP NF-YC 97 prdelk 102 prdelk OVA05633.1 164 PRDELK 169 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MDQSGQQQSM VEAVTSSAPQ QTAPMVASGS PATQPTPSFP AAQQQLAYQQ VQHFHHQQQQ 60 QQQQQLQVFW SNQIQEIEQT TDFKNHSLPL ARIKKIMKAD EDVRMISAEA PVVFAKACEM 120 FILELTLRSW IHTEENKRRT LQKNDIAAAI TRTDIFDFLV DIVPRDELKE EGLGIPRAAD 180 SVPYYYVPPQ HPPQVGHPGM LYAAHQPRPP VAYMPWPQPP QQQQTQQQQP QQTDA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	144	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	1e-70	NF-YC family protein