PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05647.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 505aa MW: 55134 Da PI: 6.7819

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05647.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.6	0.0002	86	103	2	19
EETTTTEEESSHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrH 19 +C++Cgk Fs++ ++ H OVA05647.1 86 TCENCGKEFSSWKSFLEH 103 6**************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MATVVDQQPS FKHYCRICKK GFGCGRALGG HMRAHGIGEE NGNMEEDEDE DVGSDWEEKV 60 GGNQPPGNKR MYALRTNTNR LKNCRTCENC GKEFSSWKSF LEHGKCNSAD AESLVPSKGS 120 DEEDMAVEDG MTPRGGYGWS KGKRTRRAII NNKLGNSSIS NCPSSEEEDL ANCLVMLSNA 180 AHARVVVVAE TEESCASASK EEEERRKPVS GVTCAAPVTT NTNRVYNIID HSNKAAAGKG 240 VANTNNTKGM FECKACKKVF NSHQALGGHR ASHKKVKGCF AWKIDDNLEE SVIMEEDVIT 300 NEEFLIPTKS TAQPVLQLDH NHRHHHQPSS SYKKKSKVHE CSICHRIFSS GQALGVPTTK 360 FNLSAAEPTL DLNLPAPVDD NSNTAGGRVR HEISRARLSF EMPTEIYLQP WIGSTSTVQT 420 KENIDHHQDN NNNSSSLVND YNQDNIDHHD AAGDQANNNK VKLAKLSDLK DMNMGDGGTG 480 GGSFTWLQVG IGSSTSNNVG STKNP

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MATVVDQQPS FKHYCRICKK GFGCGRALGG HMRAHGIGEE NGNMEEDEDE DVGSDWEEKV  60
GGNQPPGNKR MYALRTNTNR LKNCRTCENC GKEFSSWKSF LEHGKCNSAD AESLVPSKGS  120
DEEDMAVEDG MTPRGGYGWS KGKRTRRAII NNKLGNSSIS NCPSSEEEDL ANCLVMLSNA  180
AHARVVVVAE TEESCASASK EEEERRKPVS GVTCAAPVTT NTNRVYNIID HSNKAAAGKG  240
VANTNNTKGM FECKACKKVF NSHQALGGHR ASHKKVKGCF AWKIDDNLEE SVIMEEDVIT  300
NEEFLIPTKS TAQPVLQLDH NHRHHHQPSS SYKKKSKVHE CSICHRIFSS GQALGVPTTK  360
FNLSAAEPTL DLNLPAPVDD NSNTAGGRVR HEISRARLSF EMPTEIYLQP WIGSTSTVQT  420
KENIDHHQDN NNNSSSLVND YNQDNIDHHD AAGDQANNNK VKLAKLSDLK DMNMGDGGTG  480
GGSFTWLQVG IGSSTSNNVG STKNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35280.1	6e-18	C2H2 family protein