PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05768.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 699aa MW: 77605.5 Da PI: 5.0931

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05768.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.4	6e-14	488	534	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ OVA05768.1 488 NHVLAERRRREKLNERFIVLRSLVPFV-----TKMDKASILGDTIEYVKQLR 534 7999********************8.....8***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 699 aa Download sequence
MAAPPSSSRL QQMLQSAVQA VNWTYSLYWQ VCPQQGILVW GDGYYNGAIK TRKTVQPVEV 60 STEEASLQRS QQLRELYESL SAEETNQPAR RPCAALSPED LTESEWFYLM SVSFSFPPGV 120 GLPGKAFTRQ QHVWLTGANE TESKNFSRAI LAKSAHIQTV LCIPHAEGVI ELGTTERVQE 180 DLGLIQYVKS FFTEYQHHPK PALSEHSTSN PAASSEQFHF NSTPGLLAMY SAAHPISHPN 240 QEENDEDEED DEEEEEEEEE DGSESDSQAE TGRNSYATTA QDPIRLCDPI IQGVATAQVG 300 ATAEPSELVQ LEMSEDIRLG SPDDGSNNLG PDVNMFGVSH IDHHHRVEPP ARRWPALQDQ 360 LSGGGGGGGG LQLPVSEDLQ MEELTQEDSH YSQTVSTILQ QNPVRWPEYS AIGYVGYSSQ 420 SAFGKWSNQT NHLLHLPLDG NSSQYLLKYI LFHVPFLHNK YRDENYSRSS EAPNRLRKGA 480 SQEDLSANHV LAERRRREKL NERFIVLRSL VPFVTKMDKA SILGDTIEYV KQLRRRIQDL 540 ESKNQSTDGD QRSKGGVNIT KENRILHGNS GGAGGSMPMV LDTIGLPGSE KRKLRIVEGS 600 GGAKAKVLDI PPLVGNAVQV SIIESDALLE LKCLYREGLL LEIMQTLREL RLEITAVQSS 660 SNNSIFVAEL RAKVKESVSG KKPTIVEVKR AIHQILSHY

Sequence ? help Back to Top

Protein Sequence Length: 699 aa Download sequence

MAAPPSSSRL QQMLQSAVQA VNWTYSLYWQ VCPQQGILVW GDGYYNGAIK TRKTVQPVEV  60
STEEASLQRS QQLRELYESL SAEETNQPAR RPCAALSPED LTESEWFYLM SVSFSFPPGV  120
GLPGKAFTRQ QHVWLTGANE TESKNFSRAI LAKSAHIQTV LCIPHAEGVI ELGTTERVQE  180
DLGLIQYVKS FFTEYQHHPK PALSEHSTSN PAASSEQFHF NSTPGLLAMY SAAHPISHPN  240
QEENDEDEED DEEEEEEEEE DGSESDSQAE TGRNSYATTA QDPIRLCDPI IQGVATAQVG  300
ATAEPSELVQ LEMSEDIRLG SPDDGSNNLG PDVNMFGVSH IDHHHRVEPP ARRWPALQDQ  360
LSGGGGGGGG LQLPVSEDLQ MEELTQEDSH YSQTVSTILQ QNPVRWPEYS AIGYVGYSSQ  420
SAFGKWSNQT NHLLHLPLDG NSSQYLLKYI LFHVPFLHNK YRDENYSRSS EAPNRLRKGA  480
SQEDLSANHV LAERRRREKL NERFIVLRSL VPFVTKMDKA SILGDTIEYV KQLRRRIQDL  540
ESKNQSTDGD QRSKGGVNIT KENRILHGNS GGAGGSMPMV LDTIGLPGSE KRKLRIVEGS  600
GGAKAKVLDI PPLVGNAVQV SIIESDALLE LKCLYREGLL LEIMQTLREL RLEITAVQSS  660
SNNSIFVAEL RAKVKESVSG KKPTIVEVKR AIHQILSHY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	493	498	ERRRRE
2	494	499	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	8e-95	bHLH family protein