PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05786.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

NF-YC

Protein Properties

Length: 260aa MW: 28845.6 Da PI: 6.0762

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05786.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	177.5	1.3e-55	79	182	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie++tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflvdiv OVA05786.1 79 QLQTFWANQfqeIEQTTDFKNHSLPLARIKKIMKADEDVRMIAAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 177 89****99999********************************************************************************** PP NF-YC 97 prdel 101 pr++l OVA05786.1 178 PREDL 182 987 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MDQQGHGQAP VMGVAGSAGQ MPYGAAQFQS NQMIGAPPVG SIQSPGQTAG FSASQAQLAQ 60 HQLAYQQIHQ QQQQQLHQQL QTFWANQFQE IEQTTDFKNH SLPLARIKKI MKADEDVRMI 120 AAEAPVIFAR ACEMFILELT LRSWNHTEEN KRRTLQKNDI AAAITRTDIF DFLVDIVPRE 180 DLKDEVLASI PRAGGVTVGG PAEALPYFYM PPQHSPQVGT AGMMMGKPVV DQALYGQQPH 240 PYMAQQMWPQ PPQQQQQADS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	152	158	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	5e-81	NF-YC family protein