PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05795.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Whirly

Protein Properties

Length: 261aa MW: 29038.2 Da PI: 9.7643

Description

Whirly family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05795.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Whirly	196.1	4.9e-61	65	201	2	138
Whirly 2 vyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlp 100 ++k+kaal++ +v+p+f+++++gn++++++G++ll++ +a++erkydW+kkq+falsate+++l++l++ +s+effhdp++k+sn+G+vrk+l+v+Pl+ OVA05795.1 65 LFKGKAALSMSPVLPKFSKINAGNMRVEKKGSVLLTFFPAIGERKYDWQKKQVFALSATELGSLISLGPADSAEFFHDPSMKTSNAGQVRKSLSVKPLS 163 79*********************************************************************************************** PP Whirly 101 dGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsll 138 d G++++l+v n ++k+ne+f+vPvskaefav+r+ + OVA05795.1 164 DDGGYYFSLNVVNAMLKTNERFYVPVSKAEFAVMRTSF 201 *********************************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MMKKFSHFLT SRSALSELLL SRKASNIEDA LWSRSFISQA GISSARPDFA SNGNNLGKVF 60 VDYTLFKGKA ALSMSPVLPK FSKINAGNMR VEKKGSVLLT FFPAIGERKY DWQKKQVFAL 120 SATELGSLIS LGPADSAEFF HDPSMKTSNA GQVRKSLSVK PLSDDGGYYF SLNVVNAMLK 180 TNERFYVPVS KAEFAVMRTS FSFILPHIMG WDRLFNHQVP ASTSVSPMRQ PEMQLNPDLE 240 WDSNQSAQPI WICDSETDPG I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71260.1	2e-84	Whirly family protein