PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA05882.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family MYB_related
Protein Properties Length: 310aa    MW: 34018.9 Da    PI: 10.4601
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA05882.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.93.7e-11555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT eE+  l+ +v ++G g W+tI +          R+  ++k++w++
       OVA05882.1  5 KQKWTNEEESALKAGVVKHGAGKWRTILKDPEfsgvlSLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MGAPKQKWTN EEESALKAGV VKHGAGKWRT ILKDPEFSGV LSLRSNVDLK DKWRNMSVTA  60
NGWGSREKAR LALKRSQQIL KHVENNKLAL STVVQSDEEI VDAKPLAISS GVLQITGPKK  120
SISRLENLIL EAINNLKEPT GSNKTAIGIY IEDQYDAPQN FKRILSAKLK SMTSNGKLIK  180
VKRKYRIAPR SRFSEGRSSA MLFLEGGHRD SPKVEKADLR ILTKSQIDAE LAKMRNMTAQ  240
EAAAAAARAV AEAEAAIAEA EEAAREAEAA EADAEATQAF AEAAMMTLKN RNASKLRRDM  300
VEGPNKAQIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.14e-87MYB_related family protein