PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05922.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 558aa MW: 62307.3 Da PI: 8.7746

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05922.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.6	5e-17	62	108	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde l +av+++ g++Wk+Ia+ ++ R++ qc +rwqk+l OVA05922.1 62 KGGWTPEEDETLRNAVELFKGKSWKKIAEIFP-DRSEVQCLHRWQKVL 108 688***************************.**********986 PP
2	Myb_DNA-binding	61.7	1.5e-19	114	160	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++++++v ++G+ W+ Ia+ ++ gR +kqc++rw+++l OVA05922.1 114 KGPWTQEEDDRIIELVSKYGPTKWSVIAKSLP-GRIGKQCRERWHNHL 160 79****************************.***********97 PP
3	Myb_DNA-binding	53.9	4.1e-17	166	209	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT +E++ l +a++ +G++ W+ Ia+ ++ gRt++++k++w++ OVA05922.1 166 KDAWTSDEELALMNAHRIYGNK-WAEIAKVLP-GRTDNSIKNHWNS 209 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MDEVKIEQFC FENKQSAATS SSSVSEGSCS VALKSPGICS PTTTASPPQS HRRTTGPIRR 60 AKGGWTPEED ETLRNAVELF KGKSWKKIAE IFPDRSEVQC LHRWQKVLNP ELIKGPWTQE 120 EDDRIIELVS KYGPTKWSVI AKSLPGRIGK QCRERWHNHL NPMIKKDAWT SDEELALMNA 180 HRIYGNKWAE IAKVLPGRTD NSIKNHWNSS LKKKLNFYLA TGELPPVPKT AENVAKDISR 240 ATAHGNFLAC SKKTTTQTSS ETEDMCKVEV DCKDQLRFST PQFLVTDAST SIRLIDLTNS 300 NDVEWMPHTS KLDPGSNSYS TPKPVKCRGG EIDRENKVDG TMMQFGIATF GSLYYEPPQL 360 ENCGIPLDST LLQTYWSMQQ TYSSSSDMSA DGYFTPPCAK VTSLSGQSPE SILKNAARSF 420 PHTPSILRKR NREAHSLHPP DRVGQTDGIK AMDSLCTPEE KQRTGNNQEH SDSPKSSLYE 480 TPASHSKGTI GLYDRKAFNS SPPYRLRLKR TALFKSVGKQ LEFTLDKDKL DRTTSMNLVK 540 GGNHVTEDCP QTVKIGVS

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MDEVKIEQFC FENKQSAATS SSSVSEGSCS VALKSPGICS PTTTASPPQS HRRTTGPIRR  60
AKGGWTPEED ETLRNAVELF KGKSWKKIAE IFPDRSEVQC LHRWQKVLNP ELIKGPWTQE  120
EDDRIIELVS KYGPTKWSVI AKSLPGRIGK QCRERWHNHL NPMIKKDAWT SDEELALMNA  180
HRIYGNKWAE IAKVLPGRTD NSIKNHWNSS LKKKLNFYLA TGELPPVPKT AENVAKDISR  240
ATAHGNFLAC SKKTTTQTSS ETEDMCKVEV DCKDQLRFST PQFLVTDAST SIRLIDLTNS  300
NDVEWMPHTS KLDPGSNSYS TPKPVKCRGG EIDRENKVDG TMMQFGIATF GSLYYEPPQL  360
ENCGIPLDST LLQTYWSMQQ TYSSSSDMSA DGYFTPPCAK VTSLSGQSPE SILKNAARSF  420
PHTPSILRKR NREAHSLHPP DRVGQTDGIK AMDSLCTPEE KQRTGNNQEH SDSPKSSLYE  480
TPASHSKGTI GLYDRKAFNS SPPYRLRLKR TALFKSVGKQ LEFTLDKDKL DRTTSMNLVK  540
GGNHVTEDCP QTVKIGVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-146	MYB family protein