PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05926.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 362aa MW: 41440.1 Da PI: 10.0631

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05926.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48	2.8e-15	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++++++m+ + R +k+c +rw +yl OVA05926.1 4 RQRWRAEEDALLRAYVKQYGPREWNLVSQRMNtpLDRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	36.4	1.2e-11	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + OVA05926.1 59 KGSLTEEEQRLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MKERQRWRAE EDALLRAYVK QYGPREWNLV SQRMNTPLDR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENVKTIDP 120 IEEGKYDRIL ETFAEKLVRE RSTSTTPFFM ATSNGGFLHS DAATAPPAPT LLPAWLSSST 180 GPPTTSSPSV ALTLSPSTIA PSPAIPWLQP ERTGTDNNPS LALGNLPPHS SVPTSGDRLM 240 VTELAECCRE LEEGHRAWAA HKKEASWRLK RVELQLESEK ACRRREKMEE IESKVRALRE 300 EQKVTLERIE AEYREQLAGL RRDAEAKEQK LADQWAAKHV RLTKFLEQLG CRSRPSTESN 360 GR

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MKERQRWRAE EDALLRAYVK QYGPREWNLV SQRMNTPLDR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKENVKTIDP  120
IEEGKYDRIL ETFAEKLVRE RSTSTTPFFM ATSNGGFLHS DAATAPPAPT LLPAWLSSST  180
GPPTTSSPSV ALTLSPSTIA PSPAIPWLQP ERTGTDNNPS LALGNLPPHS SVPTSGDRLM  240
VTELAECCRE LEEGHRAWAA HKKEASWRLK RVELQLESEK ACRRREKMEE IESKVRALRE  300
EQKVTLERIE AEYREQLAGL RRDAEAKEQK LADQWAAKHV RLTKFLEQLG CRSRPSTESN  360
GR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-154	MYB family protein