PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA05940.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Trihelix

Protein Properties

Length: 635aa MW: 71770.3 Da PI: 6.5695

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA05940.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	96.6	2.2e-30	164	249	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r+++++r++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea OVA05940.1 164 RWPRQETLTLLEIRSRLDHRFKEANQKGPLWDEVSRIMaEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKNYRFFRQLEA 249 8***********************************999*************************97..66678*****85 PP
2	trihelix	85	9.4e-27	479	564	2	86
trihelix 2 WtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W++ e+ Li +r+ me+r+++ g+++++lWee+s+km g+ rs++ C+ekw n+nk+ +k++e +kkr+++s+s cpyf++++ OVA05940.1 479 WPEAEISSLIHLRTGMESRFQQcGCSEGALWEEISAKMTCLGYDRSAQNCEEKWMNINKYIRKTNECNKKRKENSRSACPYFQHVD 564 *******************889*********************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 635 aa Download sequence
MGDHHQYGLA DLRQMIAGRT RFPVDVPQPA EVVEQFLNGH PNLTIGHHYE MLMLGPRQLG 60 SSGGGGGGVG SDHQHYHPHH HHHQVVLPRG VMEFCSADST TTNSTTNITT NATATTNPTT 120 TGGGGGGDGD GGGVCGSLEM MEAGCCNMNN VVNGGGITDG GNSRWPRQET LTLLEIRSRL 180 DHRFKEANQK GPLWDEVSRI MAEEHGYQRS GKKCREKFEN LYKYYKKTKE GKAGRQDGKN 240 YRFFRQLEAL YGETAINNPV SVSETHFDNS NILRFQTTNN TTSTQSNIQT EGLLQAHHQK 300 HSESLSLSNS SEFDTTSSSE EEDANDNAIA FMENDDSKNK KLKDNQRHKR GSRKNWKAKI 360 KDFVDSRMKK LMETQEAWLE KMLKTLENKE QERIHREEEW KKQETARLDR EHKFWAKERA 420 WFEARDAALM EALQRFIGTE LKVASPEEVM ARDIHENSEN QNENGTGTLE KTNVNSHTWP 480 EAEISSLIHL RTGMESRFQQ CGCSEGALWE EISAKMTCLG YDRSAQNCEE KWMNINKYIR 540 KTNECNKKRK ENSRSACPYF QHVDSLYSHE GAFAGHGMDE EGPETMGIQL NDGPSPSNSN 600 AGTTVQDNCF RFMMTTDQRE NLWENYGVKL NKGGN

Sequence ? help Back to Top

Protein Sequence Length: 635 aa Download sequence

MGDHHQYGLA DLRQMIAGRT RFPVDVPQPA EVVEQFLNGH PNLTIGHHYE MLMLGPRQLG  60
SSGGGGGGVG SDHQHYHPHH HHHQVVLPRG VMEFCSADST TTNSTTNITT NATATTNPTT  120
TGGGGGGDGD GGGVCGSLEM MEAGCCNMNN VVNGGGITDG GNSRWPRQET LTLLEIRSRL  180
DHRFKEANQK GPLWDEVSRI MAEEHGYQRS GKKCREKFEN LYKYYKKTKE GKAGRQDGKN  240
YRFFRQLEAL YGETAINNPV SVSETHFDNS NILRFQTTNN TTSTQSNIQT EGLLQAHHQK  300
HSESLSLSNS SEFDTTSSSE EEDANDNAIA FMENDDSKNK KLKDNQRHKR GSRKNWKAKI  360
KDFVDSRMKK LMETQEAWLE KMLKTLENKE QERIHREEEW KKQETARLDR EHKFWAKERA  420
WFEARDAALM EALQRFIGTE LKVASPEEVM ARDIHENSEN QNENGTGTLE KTNVNSHTWP  480
EAEISSLIHL RTGMESRFQQ CGCSEGALWE EISAKMTCLG YDRSAQNCEE KWMNINKYIR  540
KTNECNKKRK ENSRSACPYF QHVDSLYSHE GAFAGHGMDE EGPETMGIQL NDGPSPSNSN  600
AGTTVQDNCF RFMMTTDQRE NLWENYGVKL NKGGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-126	Trihelix family protein