PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA06023.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family NF-YB
Protein Properties Length: 204aa    MW: 22856.6 Da    PI: 4.7468
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA06023.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB392e-129101693
       NF-YB   6 rflPianvsrimkkvlPanak.....iskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                 ++lP a v r++k+ l + +      + k+a     e +  fi ++++ a+d c++ kr+t+n+ d++ al ++ f +++ plk+ l  ++  
  OVA06023.1   9 EELPRAIVRRVVKEKLSESSSdgeiyVHKEALLAFSESARIFIHYLSATANDICKESKRQTLNAGDIFKALEEIEFPEFIGPLKASLDDFKRK 101
                 679***********998654222222689999999***************************************************9998765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MAKAAAEVEE LPRAIVRRVV KEKLSESSSD GEIYVHKEAL LAFSESARIF IHYLSATAND  60
ICKESKRQTL NAGDIFKALE EIEFPEFIGP LKASLDDFKR KNAGKKAGAA KAKEADKKRK  120
MEEEPSEQNE DQEDGREDEG EEADEDENDN ADSGVLRDCN PPVLPSNARL ACTIEMILTR  180
KEISHANIFD IQLVHGHPLF FRKN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199120KRKNAGKKAGAAKAKEADKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.17e-42NF-YB family protein