PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA06140.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

Protein Properties

Length: 378aa MW: 43559.1 Da PI: 6.07

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA06140.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	40.3	5.7e-13	38	132	4	98
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS....-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesg....rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + ++s+ +++ l++p kf++++g++ s +l+ + g +W+v+++ + + g++ +++G +eF + ++ g ++F++dg+s f +v +f+ OVA06140.1 38 QIIHSSIIQNQKLTIPQKFVRKYGED--FSDNAILKVPGGssssSVWNVEMKRNSSNGGVCFKSGLNEFFEYYSICPGHLLMFRYDGNSHF--HVVIFD 132 456899999************877..56677888777777889**76666666**************************9999..999887 PP
2	B3	47.4	3.4e-15	272	372	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS...SEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr...sefelvv 94 ff+v ++s + ++ l +p +f e+h ++k e ++le +grsW++ + ++++r+ ++kG F ++n+L egD++vF+++ r s+ l+v OVA06140.1 272 FFTVALQSAYVHHKYLPIPSTFKEKHLLEKLE--YIRLEVADGRSWRIWFVSssGRGDERIRFSKGVAAFLSSNNLVEGDICVFEMMMRkksSKLVLKV 368 778888999999999*********888655..7********9995555666677***********************66333135555666 PP EEE- CS B3 95 kvfr 98 ++fr OVA06140.1 369 HIFR 372 6666 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MNCIGSTSRG GTKNNNKERH EIRSFDQETD KMEPRFFQII HSSIIQNQKL TIPQKFVRKY 60 GEDFSDNAIL KVPGGSSSSS VWNVEMKRNS SNGGVCFKSG LNEFFEYYSI CPGHLLMFRY 120 DGNSHFHVVI FDMSASEIDY PCFNNNNNNN NNNNNNNNNN NFDDSDDEEE EDPAVEDDEG 180 PSETKSWEED QTEDEEDYYI KNSDVLSPSG DDDDDSSEEE VNITHNVVNK KKKKKKKKKN 240 GGYDHQRRTS RALKTQVRAN QIANEFESKH PFFTVALQSA YVHHKYLPIP STFKEKHLLE 300 KLEYIRLEVA DGRSWRIWFV SSSGRGDERI RFSKGVAAFL SSNNLVEGDI CVFEMMMRKK 360 SSKLVLKVHI FRHPPGEL

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MNCIGSTSRG GTKNNNKERH EIRSFDQETD KMEPRFFQII HSSIIQNQKL TIPQKFVRKY  60
GEDFSDNAIL KVPGGSSSSS VWNVEMKRNS SNGGVCFKSG LNEFFEYYSI CPGHLLMFRY  120
DGNSHFHVVI FDMSASEIDY PCFNNNNNNN NNNNNNNNNN NFDDSDDEEE EDPAVEDDEG  180
PSETKSWEED QTEDEEDYYI KNSDVLSPSG DDDDDSSEEE VNITHNVVNK KKKKKKKKKN  240
GGYDHQRRTS RALKTQVRAN QIANEFESKH PFFTVALQSA YVHHKYLPIP STFKEKHLLE  300
KLEYIRLEVA DGRSWRIWFV SSSGRGDERI RFSKGVAAFL SSNNLVEGDI CVFEMMMRKK  360
SSKLVLKVHI FRHPPGEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	230	236	KKKKKKK
2	230	238	KKKKKKKKK
3	230	239	KKKKKKKKKK
4	231	237	KKKKKKK
5	231	239	KKKKKKKKK
6	232	238	KKKKKKK
7	233	239	KKKKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-20	B3 family protein