PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA06174.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MIKC_MADS

Protein Properties

Length: 142aa MW: 16543.9 Da PI: 10.2229

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA06174.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	91	5.9e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvt+skRr+gi+KKA ELSvLCdaev++ii+sst+k+ +y++ OVA06174.1 9 KRIENSTNRQVTYSKRRAGIFKKARELSVLCDAEVSLIIISSTDKVSDYIT 59 79*********************************************9975 PP
2	K-box	55.3	2.9e-19	71	139	1	69
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 yq+ ++ +l+++++e+lq++l+k k+ ++ L+re+R+++GedL+ Ls++e Leq+L +sl+ +R +K OVA06174.1 71 YQEVTKIDLWSSHYEKLQENLNKQKEINSRLRREIRQRKGEDLNGLSYQEVCGLEQNLGSSLEIVRHRK 139 67788889************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence
MGRGKIEIKR IENSTNRQVT YSKRRAGIFK KARELSVLCD AEVSLIIISS TDKVSDYITP 60 STNTKKLFDK YQEVTKIDLW SSHYEKLQEN LNKQKEINSR LRREIRQRKG EDLNGLSYQE 120 VCGLEQNLGS SLEIVRHRKV IN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54340.1	8e-50	MIKC_MADS family protein