PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA06470.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 279aa MW: 31611.6 Da PI: 9.8693

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA06470.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.9	5.6e-09	25	71	3	47
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 rWT +E +l+ a + + ++ +W +Ia++++ g+t +++ + + OVA06470.1 25 RWTHDENKLFESALAIHDKEtpdRWQKIAAMIP-GKTVMDVIKQYKEL 71 9***************99*********.*99999888765 PP
2	Myb_DNA-binding	41.3	3.6e-13	126	170	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + k++G+g+W+ I+r Rt+ q+ s+ qky OVA06470.1 126 PWTEEEHRLFLLGLKKYGKGDWRNISRNYVISRTPTQVASHAQKY 170 8***************************89**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MKWEMEILSK ASYPNWFLEE SKNTRWTHDE NKLFESALAI HDKETPDRWQ KIAAMIPGKT 60 VMDVIKQYKE LLDDVSHIEA GLIPIPGYTT SSFTLEWVNN HRGFGSGGKR SSSGRPTDQE 120 RKKGVPWTEE EHRLFLLGLK KYGKGDWRNI SRNYVISRTP TQVASHAQKY FIRQLSGGKD 180 KRRSSIHDIT TVNCIETTPQ PDNNRPHSPD QSAFLSQPNM GITPKAVFDW NQPNNGTSMV 240 FGQTNGNMFV PPPYGIGSYG MKPQGQNLHR GAFHGSHVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38090.1	2e-81	MYB family protein