PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA06488.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 512aa MW: 57285 Da PI: 6.1677

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA06488.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.6	6e-18	151	197	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd llv++vkq+G + W+ Ia+++ gR +kqc++rw+++l OVA06488.1 151 KGQWTDEEDSLLVRLVKQYGVRKWAQIAQKLV-GRAGKQCRERWHNHL 197 799***************************.***********97 PP
2	Myb_DNA-binding	51.5	2.3e-16	203	245	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W++eE+ llv+ +++ G++ W+ Ia++++ gRt++ +k++w+ OVA06488.1 203 KDTWSEEEERLLVETHQKVGNR-WAEIAKRIP-GRTENAIKNHWN 245 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MEEGGGFGFR FLDTNSPPHL VLPVTRPPPL AAAIDKFLWS GNELSLEKEI NPTNVLNKQN 60 NGLFCEFSST YCCAAIDDGG YSSGSGGGFS LPNLRDMSFV DGLFVDGNLL MSTTTGDESI 120 LYNNNKLLGE KNNKRVKGGG GYSSSSPTFI KGQWTDEEDS LLVRLVKQYG VRKWAQIAQK 180 LVGRAGKQCR ERWHNHLRPD IKKDTWSEEE ERLLVETHQK VGNRWAEIAK RIPGRTENAI 240 KNHWNATKRR LNSRRKNKKS VSQRAKSQQS ILQDYIKSKC IKESSSSSSS SATTTSTNTT 300 STTGSGDHFM NPSNQFNLVN PEPSDSSFAD HDSLTLVSHT YDDELLFIQK FFENIYKQPS 360 ENKVLGSIDH EKTTNYDHGH LQNSASPFDI LDSSPIYNNT HQPLMEIGHE FLNVSSSTNN 420 TWTHNDGSSS DANTTTHMYS DLYLSYLLNG VSSSDDPSIF HYYDDNENPN NMDYLLIDHD 480 QSSYSTTTTT TGKKDMDLIE MVSSSTSNQF SK

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MEEGGGFGFR FLDTNSPPHL VLPVTRPPPL AAAIDKFLWS GNELSLEKEI NPTNVLNKQN  60
NGLFCEFSST YCCAAIDDGG YSSGSGGGFS LPNLRDMSFV DGLFVDGNLL MSTTTGDESI  120
LYNNNKLLGE KNNKRVKGGG GYSSSSPTFI KGQWTDEEDS LLVRLVKQYG VRKWAQIAQK  180
LVGRAGKQCR ERWHNHLRPD IKKDTWSEEE ERLLVETHQK VGNRWAEIAK RIPGRTENAI  240
KNHWNATKRR LNSRRKNKKS VSQRAKSQQS ILQDYIKSKC IKESSSSSSS SATTTSTNTT  300
STTGSGDHFM NPSNQFNLVN PEPSDSSFAD HDSLTLVSHT YDDELLFIQK FFENIYKQPS  360
ENKVLGSIDH EKTTNYDHGH LQNSASPFDI LDSSPIYNNT HQPLMEIGHE FLNVSSSTNN  420
TWTHNDGSSS DANTTTHMYS DLYLSYLLNG VSSSDDPSIF HYYDDNENPN NMDYLLIDHD  480
QSSYSTTTTT TGKKDMDLIE MVSSSTSNQF SK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58850.1	3e-64	MYB family protein