PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA06679.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

C2H2

Protein Properties

Length: 519aa MW: 57817.3 Da PI: 7.2228

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA06679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0014	91	107	3	19
ETTTTEEESSHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrH 19 C++Cg+ Fs++ ++ H OVA06679.1 91 CENCGMEFSSWKSFLEH 107 **************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MAMVVDQQPT YKHFCRICKK GFGCGRALGG HMRAHGIGDD NLNIDDEDTS NDWDDHHHRH 60 KLHDGNNHPP SNKRMYALRT NPNRLKSCRI CENCGMEFSS WKSFLEHGKC NSLVGGGYTD 120 PANHVITPPE SDDEDGGVAR TWSKGIRSRR AKLGINSNLM NYPLTEEEDL ANCLVLLSSA 180 RVDHPILVAE TEESCASASK EENKRRKPIS FFVSPVNDHQ VLLQNDQNKA KGIAGTKGMF 240 ECKACKKVFN SHQALGGHRA SHKKVKGCYA AKHNEIHDHE SITMEEDVIT HDEFLISSSK 300 STAINQSFDN ERNAGTNPPT AKRKSKVHEC SICHRIFSSG QALGGHKRCH WVTSNSPDIT 360 SNSIVFHQFK EQKQNYHQRS SSTHLNKQFD LQQPASSVLD LNLNLPAPVD EVAAGLAQQK 420 INPENQLAGF EVPWIGLYTN NNDVFDNEKQ HHKNNNDTKI MVNHNLKIND EDQSDDQAYS 480 NVKLAKLSDL KDMKMGDGSS SPWLQVGIGS STSNVGSEP

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MAMVVDQQPT YKHFCRICKK GFGCGRALGG HMRAHGIGDD NLNIDDEDTS NDWDDHHHRH  60
KLHDGNNHPP SNKRMYALRT NPNRLKSCRI CENCGMEFSS WKSFLEHGKC NSLVGGGYTD  120
PANHVITPPE SDDEDGGVAR TWSKGIRSRR AKLGINSNLM NYPLTEEEDL ANCLVLLSSA  180
RVDHPILVAE TEESCASASK EENKRRKPIS FFVSPVNDHQ VLLQNDQNKA KGIAGTKGMF  240
ECKACKKVFN SHQALGGHRA SHKKVKGCYA AKHNEIHDHE SITMEEDVIT HDEFLISSSK  300
STAINQSFDN ERNAGTNPPT AKRKSKVHEC SICHRIFSSG QALGGHKRCH WVTSNSPDIT  360
SNSIVFHQFK EQKQNYHQRS SSTHLNKQFD LQQPASSVLD LNLNLPAPVD EVAAGLAQQK  420
INPENQLAGF EVPWIGLYTN NNDVFDNEKQ HHKNNNDTKI MVNHNLKIND EDQSDDQAYS  480
NVKLAKLSDL KDMKMGDGSS SPWLQVGIGS STSNVGSEP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	204	231	KRRKPISFFVSPVNDHQVLLQNDQNKAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35280.1	3e-26	C2H2 family protein