PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA06714.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family SBP
Protein Properties Length: 146aa    MW: 16985 Da    PI: 8.389
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA06714.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP132.81.1e-4165140277
                 -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
         SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                 Cq+e+C++dl++a++yhrrhkvCe+hskapvv+v+gl+qrfCqqCsrfhelsefDe+krsCrrrLa+hnerr k++
  OVA06714.1  65 CQAEKCNSDLTDARSYHRRHKVCEFHSKAPVVIVAGLRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNERRLKPR 140
                 ************************************************************************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
METRIHNSRL KEKGNLKQNS KKELEEVEEE EEDDEEEELG LGFGEDDKKR KGVIKKGSGV  60
SSPFCQAEKC NSDLTDARSY HRRHKVCEFH SKAPVVIVAG LRQRFCQQCS RFHELSEFDE  120
TKRSCRRRLA GHNERRLKPR RDGPSV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135142RRLKPRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.13e-40SBP family protein