PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA06720.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family YABBY
Protein Properties Length: 213aa    MW: 23491.7 Da    PI: 7.5878
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA06720.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY232.88.1e-72101762170
       YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100
                 d+ s seq+Cyv+Cn C+t+lavsvP +slfk+vtvrCGhCt+llsvn++      + + hl++s+  + +++l  e  +   n+  +  + ++ +   
  OVA06720.1  10 DHLSPSEQLCYVHCNLCDTVLAVSVPCSSLFKTVTVRCGHCTNLLSVNMRGLLLPATNQLHLGHSFFSPTTHNLMEEIPSPAPNMLIDPPNPNDSTI-P 107
                 67899******************************************999999999999999****9999999888777766666655555444444.3 PP

       YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                   +   +e+pr+p ++rPPekrqrvPsaynrfik+eiqrika+nPdi+hreafsaaaknWahfP+ihfgl
  OVA06720.1 108 -VRGGVDELPRPPVANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDITHREAFSAAAKNWAHFPHIHFGL 176
                 .3667889***999******************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MSSSSAFSLD HLSPSEQLCY VHCNLCDTVL AVSVPCSSLF KTVTVRCGHC TNLLSVNMRG  60
LLLPATNQLH LGHSFFSPTT HNLMEEIPSP APNMLIDPPN PNDSTIPVRG GVDELPRPPV  120
ANRPPEKRQR VPSAYNRFIK DEIQRIKAGN PDITHREAFS AAAKNWAHFP HIHFGLMPDQ  180
TAGKKNNVRQ QEGEDVLMKD GFYTPANVGV SPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.14e-84YABBY family protein