PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA06750.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

NAC

Protein Properties

Length: 400aa MW: 44994 Da PI: 4.7864

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA06750.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	108.2	9.7e-34	25	164	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sgyWka 85 lp+G++F+P+d+e++++ L+k g+ + +e+i++vd i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+++ + +W++ OVA06750.1 25 LPRGVKFDPSDQEIIWHLLAKVGYGNMkphpfI--DEFIPTVDendgICYTHPQNLP-GVKQDGNVSHFFHRAIKAYNTGTRKRRKIHgddqgDVRWHK 120 799**********776666544444564332..334666655556******.677888999**************85555544788* PP NAM 86 tgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 tg++k+v+ +g + g+kk++v+y +r +k+ekt+Wvmh+y+l OVA06750.1 121 TGRTKPVIL-NGVQRGCKKIMVLYmsMARGKKPEKTNWVMHQYHL 164 *******.99********7645778888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MGEVFASQSN TLIVEKKVSQ EWPGLPRGVK FDPSDQEIIW HLLAKVGYGN MKPHPFIDEF 60 IPTVDENDGI CYTHPQNLPG VKQDGNVSHF FHRAIKAYNT GTRKRRKIHG DDQGDVRWHK 120 TGRTKPVILN GVQRGCKKIM VLYMSMARGK KPEKTNWVMH QYHLGTEEDE KDGEFVVSKI 180 FYQQQAKPGD KVEQDLPLEI TEAITTKVDP VTPKSVIPEP PRTGKQHSDV EPRQEPESSF 240 VETSAENPET TELEDGMLAE WAMLNDHANQ TGEDHGNQTG EDHGNQTGED HDNHIMEDSK 300 WWEGESQFLL DSQQLVEGLS LCDELLQSQS SSGDGDGEQR KIKPCLSDYS LIGAEDLKKD 360 LEECQKLGPL DPSNIGKGKI VRPCQSDYGQ IGDEDPKKDL

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MGEVFASQSN TLIVEKKVSQ EWPGLPRGVK FDPSDQEIIW HLLAKVGYGN MKPHPFIDEF  60
IPTVDENDGI CYTHPQNLPG VKQDGNVSHF FHRAIKAYNT GTRKRRKIHG DDQGDVRWHK  120
TGRTKPVILN GVQRGCKKIM VLYMSMARGK KPEKTNWVMH QYHLGTEEDE KDGEFVVSKI  180
FYQQQAKPGD KVEQDLPLEI TEAITTKVDP VTPKSVIPEP PRTGKQHSDV EPRQEPESSF  240
VETSAENPET TELEDGMLAE WAMLNDHANQ TGEDHGNQTG EDHGNQTGED HDNHIMEDSK  300
WWEGESQFLL DSQQLVEGLS LCDELLQSQS SSGDGDGEQR KIKPCLSDYS LIGAEDLKKD  360
LEECQKLGPL DPSNIGKGKI VRPCQSDYGQ IGDEDPKKDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-129	NAC family protein