PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA06785.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 385aa MW: 43742.8 Da PI: 6.5876

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA06785.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59	1.1e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W+t ++ g+ R++k+c++rw +yl OVA06785.1 14 KGPWTAEEDQILIDYIQKHGHGSWRTLPKNAGLQRCGKSCRLRWANYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.8	2.2e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W+tIa++++ gRt++++k++w+++ OVA06785.1 67 RGRFSFEEEETIIQLHSVLGNK-WSTIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MGRAPCCDKN GLKKGPWTAE EDQILIDYIQ KHGHGSWRTL PKNAGLQRCG KSCRLRWANY 60 LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS TIAARLPGRT DNEIKNYWNT HIRKRLLKMG 120 IDPVTHTPRL DLLDLGSILR SSLCNSSNQL MNMSGLLGIQ SLVNPDLMRL VTTLLSSQQQ 180 QQQQQQQREI KPDLLLQTLQ QTQLLKHQNQ NQNQNQNQNQ FSSSFQPNQL QCPIQDISAC 240 TTSSTSSPPP YAQFLNGTQQ LQCNVEQSNP TNLISSQNSQ PNLWQDNVVI PSNFMENSVH 300 LSQNHGCHDQ FFVNSLPDQN SNFQSNDYFN QDFGFGSVLS TPSSSQTPLN SSTYMNSSTE 360 DERDSYCSDL LTFEIPDMLD INGFM

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MGRAPCCDKN GLKKGPWTAE EDQILIDYIQ KHGHGSWRTL PKNAGLQRCG KSCRLRWANY  60
LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS TIAARLPGRT DNEIKNYWNT HIRKRLLKMG  120
IDPVTHTPRL DLLDLGSILR SSLCNSSNQL MNMSGLLGIQ SLVNPDLMRL VTTLLSSQQQ  180
QQQQQQQREI KPDLLLQTLQ QTQLLKHQNQ NQNQNQNQNQ FSSSFQPNQL QCPIQDISAC  240
TTSSTSSPPP YAQFLNGTQQ LQCNVEQSNP TNLISSQNSQ PNLWQDNVVI PSNFMENSVH  300
LSQNHGCHDQ FFVNSLPDQN SNFQSNDYFN QDFGFGSVLS TPSSSQTPLN SSTYMNSSTE  360
DERDSYCSDL LTFEIPDMLD INGFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-103	MYB family protein