PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA06911.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family M-type_MADS
Protein Properties Length: 234aa    MW: 26318.9 Da    PI: 10.1218
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA06911.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF74.77.4e-241663148
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
                krie +  rqvtfskRr+g++KKA+EL++LC+ae+a+i+fs+ gk + 
  OVA06911.1 16 KRIEKEDARQVTFSKRRAGLFKKASELCILCGAEIAIIVFSPAGKSFS 63
                79******************************************9665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MVTRKRSMGR QKIEIKRIEK EDARQVTFSK RRAGLFKKAS ELCILCGAEI AIIVFSPAGK  60
SFSFGHPSVE SVVDSFLSRN SSPRDNVGRP TPLIDAHRGA SVRDLNKQYS EVLNQLEAEK  120
KRGVTLEKLR KASRNQFWWE SPIEELGLHE LEQLRVSMEE LKKNVAMRVD ELLINTTSFL  180
PPAAAAASSL GTTHHDDQFP FETKPKPNHD HHTSVVSHGY GSTYGFGFGR GRPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.12e-52M-type_MADS family protein