PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA06956.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 339aa MW: 37995.4 Da PI: 7.6989

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA06956.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.8	3.8e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl OVA06956.1 14 KGPWSPEEDSKLKEYIEKFGTGgNWIALPHKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	38.6	2.5e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ +Ed ++ ++++ G++ W+ Ia+ ++ gRt++++k++w++ OVA06956.1 69 GEFSDDEDRIICNLFASIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDSKLKEYIE KFGTGGNWIA LPHKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSDDEDRIIC NLFASIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKIMGV 120 VNSSSHEQRK PSNSNLFQSP LQTPPSIFNG NSNFYYTQTR SFMGLLADHH ESINPKSSSL 180 LNNTVSTTTT NTSLLQAQDQ GLMGPMHHYQ VKDNFLMFGS GDQPSCSSSD GSCNQISYGN 240 KEIHEYEYDT TGTRSVGSST NCEMIMENYF YNGAHEDQNQ KFMFGAAGSC VNGPNGWIST 300 DQKPNVLSWE DNQLGFGLEE VKQLVSNNNN ACNNIIFKY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	3e-76	MYB family protein