PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA07194.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

YABBY

Protein Properties

Length: 171aa MW: 18986.6 Da PI: 8.5019

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA07194.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	211.4	3e-65	5	158	3	160
YABBY 3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekl 101 ++ se+vCyv+CnfCntilavsvP +slf+vvtvrCGhC++llsvn+ q l+ ++ d++ +++ +l + e+ ++ + +++s+s++ s OVA07194.1 5 LDVPSEHVCYVHCNFCNTILAVSVPGSSLFNVVTVRCGHCANLLSVNMGSLLQSLPLHQP-DHNHLQSQNRNL--SPEDSSKEYGSSSSKSNKAGSLLA 100 56789**********************************************9998875.665555544444..444444555555555555555455 PP YABBY 102 senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknW 160 s++++e +r+ p irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aakn OVA07194.1 101 STQNEEPPSRMLP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNM 158 6777777778777.9*****************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MSQSLDVPSE HVCYVHCNFC NTILAVSVPG SSLFNVVTVR CGHCANLLSV NMGSLLQSLP 60 LHQPDHNHLQ SQNRNLSPED SSKEYGSSSS KSNKAGSLLA STQNEEPPSR MLPIRPPEKR 120 QRVPSAYNRF IKEEIQRIKA SNPDISHREA FSTAAKNMEK LIKWLMVMDA A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	2e-52	YABBY family protein