PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA07340.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

bHLH

Protein Properties

Length: 400aa MW: 45014 Da PI: 5.4649

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA07340.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.1	0.00018	210	239	24	55
HCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 24 rellPk.askapskKlsKaeiLekAveYIksLq 55 ++l+P+ ++ ++Ka++L A++Y+k+Lq OVA07340.1 210 QSLMPNtY---TQDHMDKATVLGDATKYLKQLQ 239 57899966...8888*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MDISSSSDQW FSEIMGIDSI QQIAADIDHN HEVLVAGGGD DDFPLNYPSS YSFPSLLNCS 60 SSSMEAHHHH HHHHNIPDDH HSTAFLQRHL NISNPEASSS PSPPPNYLIC FGSSTTPEYL 120 PNHIDPKPFN YGAAPAGNLT GIISTTVVKP KKDEVEVVSN VVGTHNLNIV SLHHQDSYHV 180 NQMMNNEFKV IHGINNKRNI NGETKPSKPQ SLMPNTYTQD HMDKATVLGD ATKYLKQLQE 240 RVKTLEEEEQ KAKNSSGDLN QTVVFVKKSR LLLNDDDDDD NDDDKSSCNK ENKLISSTRT 300 GGHYDEEDDD DDDEPLPEIE ARCCLKNISI RIHCKNRKGV FVKILEEIEK FNLNVVHSSV 360 MPFANSSLYI TVISQMEVEF SMTLKDLVKN LKSAFRQFMY

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MDISSSSDQW FSEIMGIDSI QQIAADIDHN HEVLVAGGGD DDFPLNYPSS YSFPSLLNCS  60
SSSMEAHHHH HHHHNIPDDH HSTAFLQRHL NISNPEASSS PSPPPNYLIC FGSSTTPEYL  120
PNHIDPKPFN YGAAPAGNLT GIISTTVVKP KKDEVEVVSN VVGTHNLNIV SLHHQDSYHV  180
NQMMNNEFKV IHGINNKRNI NGETKPSKPQ SLMPNTYTQD HMDKATVLGD ATKYLKQLQE  240
RVKTLEEEEQ KAKNSSGDLN QTVVFVKKSR LLLNDDDDDD NDDDKSSCNK ENKLISSTRT  300
GGHYDEEDDD DDDEPLPEIE ARCCLKNISI RIHCKNRKGV FVKILEEIEK FNLNVVHSSV  360
MPFANSSLYI TVISQMEVEF SMTLKDLVKN LKSAFRQFMY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22770.1	8e-27	bHLH family protein