PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA07519.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

LBD

Protein Properties

Length: 484aa MW: 54833.6 Da PI: 5.4408

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA07519.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	119.3	2.1e-37	323	419	4	100
DUF260 4 aCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 aCk lrr+C++dCvlapyfp+++p++f +vhk+FGasn++k+l++lp ++r+da++++ eA +r+rdPvyG+vg+i++lqqq+ ++ el +++ e OVA07519.1 323 ACKSLRRRCPEDCVLAPYFPSTDPQRFSCVHKIFGASNITKMLQRLPGNQRSDAADCMSIEATWRVRDPVYGCVGIISQLQQQIIMVQRELTKTQGE 419 9******************************************************************************************999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MQMGKFKLFT MYVDIMPLFL LLAVDKSLAL YALIMDGLMG WTVHSSRLQE YQEYKTLMSM 60 YAEFGLIPLQ VATWGPFILI NLDENIQPQQ RADSKMVENE WLGNCSEILS TNGIDSSLSF 120 VCRREYTIEC NWKVFCDNYL DGGYHVPYAH TGLASGLKLD SYSTTIFDKV SIQACESGPE 180 EGGDDDRLGS KALYAFIYPN FMINRYGPWM DTNLVLPLGP NKCQVIFDYF LEASLKDDKA 240 FINQSLEESE RVQVFKRDLN HRHIPVAGVD FNVMSACQGI SLRQYAMSAS LCLGRGRNYM 300 ITPWCKVAPS RETGATTSSI FQACKSLRRR CPEDCVLAPY FPSTDPQRFS CVHKIFGASN 360 ITKMLQRLPG NQRSDAADCM SIEATWRVRD PVYGCVGIIS QLQQQIIMVQ RELTKTQGEI 420 AFHNAHAAQH QPQLSQQLQE QQQQQMGGIG TQEVQLQLGE PSSFNASQQD MVNLDQQHLL 480 DFYQ

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MQMGKFKLFT MYVDIMPLFL LLAVDKSLAL YALIMDGLMG WTVHSSRLQE YQEYKTLMSM  60
YAEFGLIPLQ VATWGPFILI NLDENIQPQQ RADSKMVENE WLGNCSEILS TNGIDSSLSF  120
VCRREYTIEC NWKVFCDNYL DGGYHVPYAH TGLASGLKLD SYSTTIFDKV SIQACESGPE  180
EGGDDDRLGS KALYAFIYPN FMINRYGPWM DTNLVLPLGP NKCQVIFDYF LEASLKDDKA  240
FINQSLEESE RVQVFKRDLN HRHIPVAGVD FNVMSACQGI SLRQYAMSAS LCLGRGRNYM  300
ITPWCKVAPS RETGATTSSI FQACKSLRRR CPEDCVLAPY FPSTDPQRFS CVHKIFGASN  360
ITKMLQRLPG NQRSDAADCM SIEATWRVRD PVYGCVGIIS QLQQQIIMVQ RELTKTQGEI  420
AFHNAHAAQH QPQLSQQLQE QQQQQMGGIG TQEVQLQLGE PSSFNASQQD MVNLDQQHLL  480
DFYQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26620.1	2e-40	LBD family protein