PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA07556.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

MYB

Protein Properties

Length: 1097aa MW: 123391 Da PI: 4.7306

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA07556.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.9	1.1e-13	8	53	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l OVA07556.1 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78***************************.**********986 PP
2	Myb_DNA-binding	32.6	1.8e-10	60	103	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l OVA07556.1 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1097 aa Download sequence
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACVKD ENYEPNDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR 180 LASLQKRREL KAAGIDTRQR KRKRKGIDYN AEIPFEKQPP PGFYDVTDED RPVEQPKFPT 240 TIEELEGKRR ADVEAQLRKQ DIAKNKIAQR QDAPSSVLQV NKLNDPETVR KRSKLMLPAP 300 QISDHELEEI AKMGYASDLL SGNEELAEGS GATRALLANY SQTPRQGMTP FRTPQRTPGG 360 KADAIMMEAE NLARLRESQT PLLGGDNPEL HPSDFSGVTP KKREIQTPNP MATPLSTPGA 420 MGLTPRIAMT PSSDVYSLGM TPRGTPLRDE LHINEDMDMP DSMKLELRRQ AELRRNLRSG 480 LTNLPQPRNE YQIVIQPLPQ DNEEPEDRIE EDMSDRIARE KAEEEARQQA LLRKRSKVLQ 540 RELPRPPTAS LELIRNSLMR TDEDKSSFVP PTVIEQADEM VRKELLTLLE HDNAKYPLDE 600 KVEKEKKKGG KRAPNGKSAY SIPEIEDFEE DELKEADSLI KEEVQFLRVA MGHENEPLDE 660 FVKAHDACQE DLMYFPTRNA YGLSSVAGNT EKLAALQNEF DNVKKRMDDE AKKALRLEQK 720 IKLLTHGYQM RGGKLWTQIE ATFKQMDTAA TELECFQALQ KQEKLAASYR INSLVEEIKK 780 QKELEQNLQQ RYGNLIAEQD KIERLLEEYR LQAKIQEETK AQNIDIEMSE SATNQTDMLG 840 KESPKPVESE ELGNTTIDQL NDDKDPTRLV DTSQEPDNTH SSPKDTETDG EQNSSKNMDL 900 NLSHVAVAEN KEASMQGNSC EGPTPSETRE TADGENPSVV SLQAPAVPVH ASAENGDSVP 960 NSGTESIAVD SGDNAEVPNE ELNALPHNTN PESEIPSEDH QIVKEACKQD GILSNAEDSI 1020 QHVADDAYSN GNSTLVPHGE EKTTISDVEA VGQNMDLDGA KEAVSTSDGN LTQKPVESVD 1080 NVVGLDQETT EKVAGNE

Sequence ? help Back to Top

Protein Sequence Length: 1097 aa Download sequence

MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACVKD ENYEPNDDPR  120
KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR  180
LASLQKRREL KAAGIDTRQR KRKRKGIDYN AEIPFEKQPP PGFYDVTDED RPVEQPKFPT  240
TIEELEGKRR ADVEAQLRKQ DIAKNKIAQR QDAPSSVLQV NKLNDPETVR KRSKLMLPAP  300
QISDHELEEI AKMGYASDLL SGNEELAEGS GATRALLANY SQTPRQGMTP FRTPQRTPGG  360
KADAIMMEAE NLARLRESQT PLLGGDNPEL HPSDFSGVTP KKREIQTPNP MATPLSTPGA  420
MGLTPRIAMT PSSDVYSLGM TPRGTPLRDE LHINEDMDMP DSMKLELRRQ AELRRNLRSG  480
LTNLPQPRNE YQIVIQPLPQ DNEEPEDRIE EDMSDRIARE KAEEEARQQA LLRKRSKVLQ  540
RELPRPPTAS LELIRNSLMR TDEDKSSFVP PTVIEQADEM VRKELLTLLE HDNAKYPLDE  600
KVEKEKKKGG KRAPNGKSAY SIPEIEDFEE DELKEADSLI KEEVQFLRVA MGHENEPLDE  660
FVKAHDACQE DLMYFPTRNA YGLSSVAGNT EKLAALQNEF DNVKKRMDDE AKKALRLEQK  720
IKLLTHGYQM RGGKLWTQIE ATFKQMDTAA TELECFQALQ KQEKLAASYR INSLVEEIKK  780
QKELEQNLQQ RYGNLIAEQD KIERLLEEYR LQAKIQEETK AQNIDIEMSE SATNQTDMLG  840
KESPKPVESE ELGNTTIDQL NDDKDPTRLV DTSQEPDNTH SSPKDTETDG EQNSSKNMDL  900
NLSHVAVAEN KEASMQGNSC EGPTPSETRE TADGENPSVV SLQAPAVPVH ASAENGDSVP  960
NSGTESIAVD SGDNAEVPNE ELNALPHNTN PESEIPSEDH QIVKEACKQD GILSNAEDSI  1020
QHVADDAYSN GNSTLVPHGE EKTTISDVEA VGQNMDLDGA KEAVSTSDGN LTQKPVESVD  1080
NVVGLDQETT EKVAGNE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	205	KRRELKAAGIDTRQRKRKRK
2	200	205	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein