PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA07707.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family LBD
Protein Properties Length: 224aa    MW: 24143.4 Da    PI: 7.7691
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA07707.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260130.66.5e-41211211100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+k+C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA ar+rdPvyG+vg+i++lqqq+ +l+aela ++
  OVA07707.1  21 PCGACKFLRRKCVKGCIFAPYFDSEQgSNHFAAVHKVFGASNVSKLLLRIPVHKRLDAVVTICYEALARIRDPVYGCVGHIFALQQQVVNLQAELAFVQ 119
                 7***********************9989********************************************************************999 PP

      DUF260  99 ee 100
                 ++
  OVA07707.1 120 AH 121
                 86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MMMMMSSSGS SSSGSGGGGG PCGACKFLRR KCVKGCIFAP YFDSEQGSNH FAAVHKVFGA  60
SNVSKLLLRI PVHKRLDAVV TICYEALARI RDPVYGCVGH IFALQQQVVN LQAELAFVQA  120
HLSTFEHLPS HHQAAAVMSS AQSSAMVNVH NSSTNILSTS NVSTHFSSLQ SQQQTNLETA  180
SCCSPTEQLP LHMNIDDGDL QTLAREFVSR YLPAEVKFQT SNSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45410.13e-66LBD family protein