PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OVA07709.1
Organism
Macleaya cordata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
Family LBD
Protein Properties Length: 258aa    MW: 26833.3 Da    PI: 8.019
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OVA07709.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260128.92.2e-40321321100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ar+rdPvyG+v++i++lqqq+ +l+ael++l+
  OVA07709.1  32 PCGACKFLRRKCVNGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHIPVHRRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVNLQAELSYLQ 130
                 7***********************9989********************************************************************999 PP

      DUF260  99 ee 100
                 ++
  OVA07709.1 131 AH 132
                 86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MSGANTCSSS GGGGGGGSCG GGGGNSGGGG GPCGACKFLR RKCVNGCIFA PYFDSEQGAA  60
HFAAVHKVFG ASNVSKLLLH IPVHRRLDAV VTICYEAQAR LRDPVYGCVA HIFALQQQVV  120
NLQAELSYLQ AHLATLELPS PPPPPALLSV PPPLSISDLP SAATVPATFD LSALFDPLVQ  180
PQWTMQQQQQ QQQSRQTDNI VRQFGGGSRT QLNNDNPSAS GGNGDLQALA RELLHRHRSL  240
VVSAPSAEPS APPPPLSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00220.11e-65LBD family protein