PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OVA07846.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

SRS

Protein Properties

Length: 256aa MW: 27351.9 Da PI: 9.3395

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OVA07846.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	115.3	8.4e-36	53	146	4	96
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa...aeaaskrkrelkskkqsalsstklssaes 96 +++C+dCGnqakkdC+h+RCRtCCksrgfdCathvkstWvpaa+rrerq a++ s a s+ ++a+ k++r ++q+++s+t++s++ OVA07846.1 53 SAITCHDCGNQAKKDCSHRRCRTCCKSRGFDCATHVKSTWVPAARRRERQLLVASTVSVAGGSSsstTSARVKKPRLI--SSQTTTSHTSTSTSAR 146 6789*********************************************99999988887776633344555555544..5555555555444332 PP
2	DUF702	38.7	3.4e-12	154	180	126	152
DUF702 126 geeelaYqtavsigGhvfkGiLydqGl 152 ++e+aYq+ v+igGhvfkG+LydqG+ OVA07846.1 154 HQDEYAYQAMVKIGGHVFKGFLYDQGV 180 689***********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MNRNQSSSSS GIQLWQNQQS LQNPNILFNT AAAGGNIISS STRRSVISTT TASAITCHDC 60 GNQAKKDCSH RRCRTCCKSR GFDCATHVKS TWVPAARRRE RQLLVASTVS VAGGSSSSTT 120 SARVKKPRLI SSQTTTSHTS TSTSARSFDT SSTHQDEYAY QAMVKIGGHV FKGFLYDQGV 180 IDDESRSDGS LIPNISDLHL GGISSNNNNE GDGRQQGMMT SSSSPIIDHP STSVYVKSAG 240 SSGLFGGTDY SNQQHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	1e-46	SRS family protein